Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA nucleotide sequences for this column Click for multiple sequence alignment for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Email Kevin Byrne Wolfe Laboratory Website Click for information on the species in YGOB 59% of length of longest homolog ( 255 nt / 432 nt ) Click for intergenic sequence Click for intergenic sequence Kpol_1002.95 - s1002 complement(241458..241712) - complement(241458..241712) [255 nt, 85 aa] Click for BLAST results 97% of length of longest homolog ( 1140 nt / 1176 nt ) Click for intergenic sequence Click for intergenic sequence Kpol_1002.94 - s1002 (240130..241269) - (240130..241269) [1140 nt, 380 aa] Click for BLAST results Click for intergenic sequence 89% of length of longest homolog ( 1851 nt / 2070 nt ) Click for intergenic sequence Kpol_1002.93 - s1002 (237922..239772) - (237922..239772) [1851 nt, 617 aa] Click for BLAST results 90% of length of longest homolog ( 1599 nt / 1770 nt ) Kpol_541.17 - s541 (48048..49646) - (48048..49646) [1599 nt, 533 aa] Click for BLAST results 62% of length of longest homolog ( 267 nt / 432 nt ) Click for intergenic sequence Click for intergenic sequence TPHA0J01950 - Chr10 (442423..442689) - Anc_6.142 YBR233W-A Click for BLAST results 96% of length of longest homolog ( 1134 nt / 1176 nt ) Click for intergenic sequence Click for intergenic sequence TPHA0J01960 - Chr10 complement(442993..444126) - Anc_6.143 YBR234C Click for BLAST results Click for intergenic sequence 90% of length of longest homolog ( 1866 nt / 2070 nt ) Click for intergenic sequence TPHA0J01970 - Chr10 complement(444695..446560) - Anc_6.145 YGL110C Click for BLAST results 94% of length of longest homolog ( 1827 nt / 1947 nt ) Click for intergenic sequence TPHA0I00310 - Chr9 (59576..61402) - Anc_8.849 YMR284W Click for BLAST results 93% of length of longest homolog ( 1590 nt / 1707 nt ) Click for intergenic sequence Click for intergenic sequence TPHA0I00320 - Chr9 complement(61470..63059) - Anc_8.850 YMR285C Click for BLAST results 95% of length of longest homolog ( 267 nt / 282 nt ) Click for intergenic sequence Click for intergenic sequence TPHA0I00330 - Chr9 (63570..63836) - Anc_8.851 YMR286W Click for BLAST results 76% of length of longest homolog ( 1188 nt / 1560 nt ) Click for intergenic sequence Click for intergenic sequence TPHA0I00340 - Chr9 complement(64246..65433) - Anc_8.852 YML119W Click for BLAST results Click for intergenic sequence 92% of length of longest homolog ( 2832 nt / 3090 nt ) Click for intergenic sequence TPHA0I00350 - Chr9 complement(65929..68760) - Anc_8.853 YMR287C Click for BLAST results 90% of length of longest homolog ( 1593 nt / 1770 nt ) TPHA0C04800 - Chr3 (1036962..1038554) - Anc_8.854 YML120C Click for BLAST results 78% of length of longest homolog ( 336 nt / 432 nt ) Click for intergenic sequence Click for intergenic sequence TBLA0A01490 - Chr1 complement(346256..346591) - Anc_6.142 YBR233W-A Click for BLAST results 100% of length of longest homolog ( 1176 nt / 1176 nt ) Click for intergenic sequence TBLA0A01480 - Chr1 (344851..346026) - Anc_6.143 YBR234C Click for BLAST results 91% of length of longest homolog ( 78 nt / 86 nt ) contains intron(s) Click for intergenic sequence TBLA0Btrna8Y - Chr2 (665948..665987,666002..666039) - tRNA Type: Tyr (Y) Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 1947 nt / 1947 nt ) Click for intergenic sequence Click for intergenic sequence TBLA0B02890 - Chr2 (666770..668716) - Anc_8.849 YMR284W Click for BLAST results 92% of length of longest homolog ( 1563 nt / 1707 nt ) Click for intergenic sequence Click for intergenic sequence TBLA0B02900 - Chr2 complement(668940..670502) - Anc_8.850 YMR285C Click for BLAST results 91% of length of longest homolog ( 258 nt / 282 nt ) Click for intergenic sequence TBLA0B02910 - Chr2 (670926..671183) - Anc_8.851 YMR286W Click for BLAST results 92% of length of longest homolog ( 3333 nt / 3624 nt ) TBLA0A09040 - Chr1 (2225598..2228930) - Anc_4.113 YGL013C Click for BLAST results 100% of length of longest homolog ( 3090 nt / 3090 nt ) TBLA0B02920 - Chr2 complement(671467..674556) - Anc_8.853 YMR287C Click for BLAST results 100% of length of longest homolog ( 879 nt / 879 nt ) Click for intergenic sequence TBLA0G02670 - Chr7 complement(705111..705989) - Anc_2.221 YNL075W Click for BLAST results 74% of length of longest homolog ( 1605 nt / 2181 nt ) Click for intergenic sequence Click for intergenic sequence TBLA0G02680 - Chr7 complement(706432..708036) - Anc_2.220 YNL076W Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 89% of length of longest homolog ( 1323 nt / 1491 nt ) Click for intergenic sequence NDAI0F01980 - Chr6 (485796..487118) - Anc_6.144 YGL111W Click for BLAST results 90% of length of longest homolog ( 77 nt / 86 nt ) contains intron(s) Click for intergenic sequence NDAI0Ktrna1Y - Chr11 (75781..75820,75832..75868) - tRNA Type: Tyr (Y) Click for intergenic sequence Click for intergenic sequence 96% of length of longest homolog ( 1863 nt / 1947 nt ) Click for intergenic sequence Click for intergenic sequence NDAI0K00360 - Chr11 (76452..78314) - Anc_8.849 Click for BLAST results 100% of length of longest homolog ( 1707 nt / 1707 nt ) Click for intergenic sequence NDAI0K00370 - Chr11 complement(78396..80102) - Anc_8.850 YML118W Click for BLAST results 93% of length of longest homolog ( 3357 nt / 3624 nt ) NDAI0D03550 - Chr4 complement(843265..846621) - Anc_4.113 Click for BLAST results 93% of length of longest homolog ( 2889 nt / 3090 nt ) NDAI0K00320 - Chr11 (60516..63404) - Anc_8.853 YMR287C Click for BLAST results 99% of length of longest homolog ( 870 nt / 879 nt ) Click for intergenic sequence NDAI0F02430 - Chr6 complement(581121..581990) - Anc_2.221 Click for BLAST results 100% of length of longest homolog ( 2181 nt / 2181 nt ) Click for intergenic sequence Click for intergenic sequence NDAI0F02440 - Chr6 complement(582404..584584) - Anc_2.220 YNL076W Click for BLAST results Click for intergenic sequence 100% of length of longest homolog ( 432 nt / 432 nt ) Click for intergenic sequence Click for intergenic sequence NCAS0D03390 - Chr4 (635166..635597) - Anc_6.142 YBR233W-A Click for BLAST results 97% of length of longest homolog ( 1143 nt / 1176 nt ) Click for intergenic sequence Click for intergenic sequence NCAS0D03400 - Chr4 complement(635698..636840) - Anc_6.143 YBR234C Click for BLAST results Click for intergenic sequence 96% of length of longest homolog ( 1980 nt / 2070 nt ) Click for intergenic sequence NCAS0D03410 - Chr4 complement(637426..639405) - Anc_6.145 YGL110C Click for BLAST results 90% of length of longest homolog ( 77 nt / 86 nt ) contains intron(s) Click for intergenic sequence NCAS0Ctrna1Y - Chr3 complement(46135..46171,46183..46222) - tRNA Type: Tyr (Y) Click for intergenic sequence Click for intergenic sequence 94% of length of longest homolog ( 1827 nt / 1947 nt ) Click for intergenic sequence Click for intergenic sequence NCAS0C00320 - Chr3 complement(44190..46016) - Anc_8.849 Click for BLAST results 98% of length of longest homolog ( 1671 nt / 1707 nt ) Click for intergenic sequence NCAS0C00310 - Chr3 (42498..44168) - Anc_8.850 Click for BLAST results 86% of length of longest homolog ( 3132 nt / 3624 nt ) NCAS0A01630 - Chr1 complement(317259..320390) - Anc_4.113 Click for BLAST results 91% of length of longest homolog ( 2823 nt / 3090 nt ) NCAS0C00300 - Chr3 (39415..42237) - Anc_8.853 YMR287C Click for BLAST results 98% of length of longest homolog ( 861 nt / 879 nt ) Click for intergenic sequence NCAS0G02870 - Chr7 (526633..527493) - Anc_2.221 Click for BLAST results 86% of length of longest homolog ( 1869 nt / 2181 nt ) Click for intergenic sequence Click for intergenic sequence NCAS0G02860 - Chr7 (524511..526379) - Anc_2.220 YNL076W Click for BLAST results Click for intergenic sequence 59% of length of longest homolog ( 255 nt / 432 nt ) Click for intergenic sequence Click for intergenic sequence KNAG0F02360 - Chr6 complement(442879..443133) - Anc_6.142 YBR233W-A Click for BLAST results 99% of length of longest homolog ( 1167 nt / 1176 nt ) Click for intergenic sequence Click for intergenic sequence KNAG0F02350 - Chr6 (441601..442767) - Anc_6.143 YBR234C Click for BLAST results Click for intergenic sequence 85% of length of longest homolog ( 1755 nt / 2070 nt ) Click for intergenic sequence KNAG0F02340 - Chr6 (439645..441399) - Anc_6.145 YGL110C Click for BLAST results 82% of length of longest homolog ( 1401 nt / 1707 nt ) Click for intergenic sequence KNAG0G03470 - Chr7 complement(743425..744825) - Anc_8.850 YMR285C Click for BLAST results 90% of length of longest homolog ( 255 nt / 282 nt ) Click for intergenic sequence Click for intergenic sequence KNAG0G03480 - Chr7 (745051..745305) - Anc_8.851 YMR286W Click for BLAST results 61% of length of longest homolog ( 954 nt / 1560 nt ) Click for intergenic sequence KNAG0G03490 - Chr7 complement(745476..746429) - Anc_8.852 YML119W Click for BLAST results 85% of length of longest homolog ( 3093 nt / 3624 nt ) KNAG0D03520 - Chr4 complement(642517..645609) - Anc_4.113 YGL013C Click for BLAST results 96% of length of longest homolog ( 1701 nt / 1770 nt ) KNAG0G03500 - Chr7 (747131..748831) - Anc_8.854 YML120C Click for BLAST results 70% of length of longest homolog ( 303 nt / 432 nt ) Click for intergenic sequence Click for intergenic sequence KAFR0A04490 - Chr1 complement(890745..891047) - Anc_6.142 YBR233W-A Click for BLAST results 96% of length of longest homolog ( 1131 nt / 1176 nt ) Click for intergenic sequence Click for intergenic sequence KAFR0A04480 - Chr1 (889486..890616) - Anc_6.143 YBR234C Click for BLAST results Click for intergenic sequence 89% of length of longest homolog ( 1848 nt / 2070 nt ) Click for intergenic sequence KAFR0A04470 - Chr1 (887431..889278) - Anc_6.145 YGL110C Click for BLAST results 90% of length of longest homolog ( 77 nt / 86 nt ) contains intron(s) Click for intergenic sequence KAFR0Atrna1Y - Chr1 (596654..596693,596709..596745) - tRNA Type: Tyr (Y) Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 84% of length of longest homolog ( 1437 nt / 1707 nt ) Click for intergenic sequence Click for intergenic sequence KAFR0A02860 - Chr1 complement(596779..598215) - Anc_8.850 YMR285C Click for BLAST results 91% of length of longest homolog ( 258 nt / 282 nt ) Click for intergenic sequence Click for intergenic sequence KAFR0A02870 - Chr1 (598363..598620) - Anc_8.851 YMR286W Click for BLAST results 83% of length of longest homolog ( 1293 nt / 1560 nt ) Click for intergenic sequence KAFR0A02880 - Chr1 complement(598691..599983) - Anc_8.852 YML119W Click for BLAST results 83% of length of longest homolog ( 2994 nt / 3624 nt ) KAFR0A06690 - Chr1 complement(1354262..1357255) - Anc_4.113 YGL013C Click for BLAST results 90% of length of longest homolog ( 1587 nt / 1770 nt ) KAFR0A02890 - Chr1 (600855..602441) - Anc_8.854 YML120C Click for BLAST results 98% of length of longest homolog ( 858 nt / 879 nt ) Click for intergenic sequence KAFR0J00820 - Chr10 (148119..148976) - Anc_2.221 YNL075W Click for BLAST results 59% of length of longest homolog ( 1290 nt / 2181 nt ) Click for intergenic sequence Click for intergenic sequence KAFR0J00810 - Chr10 (146625..147914) - Anc_2.220 YNL076W Click for BLAST results Click for intergenic sequence 88% of length of longest homolog ( 1311 nt / 1491 nt ) Click for intergenic sequence CAGL0F07403g - Chr6 (721308..722618) - similar to uniprot|P53136 Saccharomyces cerevisiae YGL111w Click for BLAST results 89% of length of longest homolog ( 1845 nt / 2070 nt ) Click for intergenic sequence CAGL0F07425g - Chr6 complement(722699..724543) - similar to uniprot|P53137 Saccharomyces cerevisiae YGL110c Click for BLAST results 83% of length of longest homolog ( 1416 nt / 1707 nt ) Click for intergenic sequence CAGL0B02387g - Chr2 complement(228209..229624) - weakly similar to uniprot|Q03264 Saccharomyces cerevisiae YMR285c or uniprot|Q03210 Saccharomyces cerevisiae YML118w Click for BLAST results Click for intergenic sequence 70% of length of longest homolog ( 1086 nt / 1560 nt ) Click for intergenic sequence Click for intergenic sequence CAGL0B02409g - Chr2 complement(230087..231172) - some similarities with uniprot|Q03208 Saccharomyces cerevisiae YML119w Click for BLAST results Click for intergenic sequence Click for intergenic sequence 89% of length of longest homolog ( 1575 nt / 1770 nt ) Click for intergenic sequence CAGL0B02431g - Chr2 (232347..233921) - highly similar to uniprot|P32340 Saccharomyces cerevisiae YML120c NDI1 NADH-ubiquinone oxidoreductase Click for BLAST results Click for intergenic sequence Click for intergenic sequence 93% of length of longest homolog ( 1392 nt / 1491 nt ) Click for intergenic sequence Click for intergenic sequence Suva_7.157 - Chr7 (294739..296130) - YGL111W (REAL) Click for BLAST results 90% of length of longest homolog ( 1869 nt / 2070 nt ) Click for intergenic sequence Suva_7.158 - Chr7 complement(296305..298173) - YGL110C (REAL) Click for BLAST results 88% of length of longest homolog ( 1509 nt / 1707 nt ) Click for intergenic sequence Suva_13.25 - Chr13 (32137..33645) - YML118W (REAL) Click for BLAST results Click for intergenic sequence 69% of length of longest homolog ( 1083 nt / 1560 nt ) Click for intergenic sequence Suva_13.24 - Chr13 (30428..31510) - YML119W (REAL) Click for BLAST results 83% of length of longest homolog ( 3003 nt / 3624 nt ) Suva_7.268 - Chr7 complement(460629..463631) - YGL013C (REAL) Click for BLAST results 87% of length of longest homolog ( 1542 nt / 1770 nt ) Suva_13.23 - Chr13 complement(28078..29619) - YML120C (REAL) Click for BLAST results 99% of length of longest homolog ( 873 nt / 879 nt ) Click for intergenic sequence Suva_14.264 - Chr14 (484369..485241) - YNL075W (REAL) Click for BLAST results 81% of length of longest homolog ( 1764 nt / 2181 nt ) Click for intergenic sequence Click for intergenic sequence Suva_14.263 - Chr14 (482296..484059) - YNL076W (REAL) Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 93% of length of longest homolog ( 1392 nt / 1491 nt ) Click for intergenic sequence Click for intergenic sequence Skud_7.165 - Chr7 (304385..305776) - YGL111W (REAL) Click for BLAST results 89% of length of longest homolog ( 1836 nt / 2070 nt ) Click for intergenic sequence Skud_7.166 - Chr7 complement(305955..307790) - YGL110C (REAL) Click for BLAST results 88% of length of longest homolog ( 1497 nt / 1707 nt ) Click for intergenic sequence Skud_13.23 - Chr13 (32056..33552) - YML118W (REAL) Click for BLAST results Click for intergenic sequence 69% of length of longest homolog ( 1071 nt / 1560 nt ) Click for intergenic sequence Skud_13.22 - Chr13 (30389..31459) - YML119W (REAL) Click for BLAST results 89% of length of longest homolog ( 3243 nt / 3624 nt ) Skud_7.274 - Chr7 complement(472171..475413) - YGL013C (REAL) Click for BLAST results 87% of length of longest homolog ( 1542 nt / 1770 nt ) Skud_13.21 - Chr13 complement(28048..29589) - YML120C (REAL) Click for BLAST results 99% of length of longest homolog ( 873 nt / 879 nt ) Click for intergenic sequence Skud_14.255 - Chr14 (475907..476779) - YNL075W (REAL) Click for BLAST results 81% of length of longest homolog ( 1761 nt / 2181 nt ) Click for intergenic sequence Click for intergenic sequence Skud_14.254 - Chr14 (473823..475583) - YNL076W (REAL) Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 94% of length of longest homolog ( 1407 nt / 1491 nt ) Click for intergenic sequence Click for intergenic sequence Smik_7.164 - Chr7 (295327..296733) - YGL111W (REAL) Click for BLAST results 90% of length of longest homolog ( 1872 nt / 2070 nt ) Click for intergenic sequence Smik_7.165 - Chr7 complement(296887..298758) - YGL110C (REAL) Click for BLAST results 88% of length of longest homolog ( 1509 nt / 1707 nt ) Click for intergenic sequence Smik_13.16 - Chr13 (28600..30108) - YML118W (REAL) Click for BLAST results Click for intergenic sequence 69% of length of longest homolog ( 1074 nt / 1560 nt ) Click for intergenic sequence Smik_13.15 - Chr13 (26900..27973) - YML119W (REAL) Click for BLAST results 89% of length of longest homolog ( 3210 nt / 3624 nt ) Smik_7.277 - Chr7 complement(461108..464317) - YGL013C (REAL) Click for BLAST results 87% of length of longest homolog ( 1542 nt / 1770 nt ) Smik_13.14 - Chr13 complement(24559..26100) - YML120C (REAL) Click for BLAST results 99% of length of longest homolog ( 873 nt / 879 nt ) Click for intergenic sequence Smik_14.251 - Chr14 (465950..466822) - YNL075W (REAL) Click for BLAST results 80% of length of longest homolog ( 1749 nt / 2181 nt ) Click for intergenic sequence Click for intergenic sequence Smik_14.250 - Chr14 (463894..465642) - YNL076W (REAL) Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 93% of length of longest homolog ( 1392 nt / 1491 nt ) Click for intergenic sequence Click for intergenic sequence YGL111W (NSA1) - Chr7 (299978..301369) - Constituent of 66S pre-ribosomal particles, involved in 60S ribosomal subunit biogenesis Click for Info Click for BLAST results 91% of length of longest homolog ( 1875 nt / 2070 nt ) Click for intergenic sequence YGL110C (CUE3) - Chr7 complement(301537..303411) - Protein of unknown function; has a CUE domain that binds ubiquitin, which may facilitate intramolecular monoubiquitination Click for Info Click for BLAST results 89% of length of longest homolog ( 1518 nt / 1707 nt ) Click for intergenic sequence YML118W (NGL3) - Chr13 (32334..33851) - 3'-5' exonuclease specific for poly-A RNAs; has a domain similar to a magnesium-dependent endonuclease motif in mRNA deadenylase Ccr4p; similar to Ngl1p and Ngl2p Click for Info Click for BLAST results Click for intergenic sequence 69% of length of longest homolog ( 1074 nt / 1560 nt ) Click for intergenic sequence YML119W - Chr13 (30611..31684) - Putative protein of unknown function; YML119W is not an essential gene; potential Cdc28p substrate Click for Info Click for BLAST results 88% of length of longest homolog ( 3207 nt / 3624 nt ) YGL013C (PDR1) - Chr7 complement(469092..472298) - Zinc cluster protein that is a master regulator involved in recruiting other zinc cluster proteins to pleiotropic drug response elements (PDREs) to fine tune the regulation of multidrug resistance genes Click for Info Click for BLAST results 87% of length of longest homolog ( 1542 nt / 1770 nt ) YML120C (NDI1) - Chr13 complement(28266..29807) - NADH:ubiquinone oxidoreductase, transfers electrons from NADH to ubiquinone in the respiratory chain but does not pump protons, in contrast to the higher eukaryotic multisubunit respiratory complex I; phosphorylated; homolog of human AMID Click for Info Click for BLAST results 99% of length of longest homolog ( 873 nt / 879 nt ) Click for intergenic sequence YNL075W (IMP4) - Chr14 (485607..486479) - Component of the SSU processome, which is required for pre-18S rRNA processing; interacts with Mpp10p; member of a superfamily of proteins that contain a sigma(70)-like motif and associate with RNAs Click for Info Click for BLAST results 80% of length of longest homolog ( 1755 nt / 2181 nt ) Click for intergenic sequence Click for intergenic sequence YNL076W (MKS1) - Chr14 (483556..485310) - Pleiotropic negative transcriptional regulator involved in Ras-CAMP and lysine biosynthetic pathways and nitrogen regulation; involved in retrograde (RTG) mitochondria-to-nucleus signaling Click for Info Click for BLAST results Click for intergenic sequence Anc_6.142 Anc_6.143 Anc_6.144 Anc_6.145 Anc_8.trna31Y - tRNA Type: Tyr (Y) | Anti-Codon: GUA Anc_8.849 Anc_8.850 Anc_8.851 Anc_8.852 Anc_4.113 Anc_8.853 Anc_8.854 Anc_2.221 Anc_2.220 59% of length of longest homolog ( 255 nt / 432 nt ) Click for intergenic sequence Click for intergenic sequence ZYRO0C14740g - Chr3 (1148129..1148383) - similar to uniprot|P69850 Saccharomyces cerevisiae YBR233W-A DAD3 Essential protein component of the DASH complex involved in spindle integrity and kinetochore function interacts with Duo1p and Dam1p localizes to intranuclear spindles and kinetochore Click for BLAST results 96% of length of longest homolog ( 1131 nt / 1176 nt ) Click for intergenic sequence Click for intergenic sequence ZYRO0C14762g - Chr3 complement(1148438..1149568) - highly similar to uniprot|P38328 Saccharomyces cerevisiae YBR234C ARC40 Essential subunit of the ARP2/3 complex which is required for the motility and integrity of cortical actin patches Click for BLAST results 84% of length of longest homolog ( 1245 nt / 1491 nt ) Click for intergenic sequence Click for intergenic sequence ZYRO0C14784g - Chr3 (1149822..1151066) - similar to uniprot|P53136 Saccharomyces cerevisiae YGL111W NSA1 Constituent of 66S pre-ribosomal particles involved in 60S ribosomal subunit biogenesis Click for BLAST results 87% of length of longest homolog ( 1806 nt / 2070 nt ) Click for intergenic sequence Click for intergenic sequence ZYRO0C14806g - Chr3 complement(1151123..1152928) - similar to uniprot|P53137 Saccharomyces cerevisiae YGL110C CUE3 Protein of unknown function has a CUE domain that binds ubiquitin which may facilitate intramolecular monoubiquitination Click for BLAST results 87% of length of longest homolog ( 75 nt / 86 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence Zrou_3.trna40Y - Chr3 (1153528..1153566,1153578..1153613) - tRNA Type: Tyr (Y) | Anti-Codon: GUA | Cove Score: 70.50 Click for intergenic sequence Click for intergenic sequence 92% of length of longest homolog ( 1785 nt / 1947 nt ) Click for intergenic sequence Click for intergenic sequence ZYRO0C14850g - Chr3 (1154196..1155980) - similar to uniprot|P32807 Saccharomyces cerevisiae YMR284W YKU70 Forms heterodimer with Yku80p known as Ku binds chromosome ends and is involved in maintaining normal telomere length and structure in addition to participating in the formation of silent chromatin at telomere-proximal genes Click for BLAST results 87% of length of longest homolog ( 1491 nt / 1707 nt ) Click for intergenic sequence Click for intergenic sequence ZYRO0C14872g - Chr3 complement(1155977..1157467) - similar to uniprot|Q03264 Saccharomyces cerevisiae YMR285C Click for BLAST results 90% of length of longest homolog ( 255 nt / 282 nt ) Click for intergenic sequence Click for intergenic sequence ZYRO0C14894g - Chr3 (1157672..1157926) - highly similar to uniprot|P20084 Saccharomyces cerevisiae YMR286W Click for BLAST results 63% of length of longest homolog ( 987 nt / 1560 nt ) Click for intergenic sequence ZYRO0C14916g - Chr3 complement(1158130..1159116) - some similarities with uniprot|Q03208 Saccharomyces cerevisiae YML119W Click for BLAST results 86% of length of longest homolog ( 3111 nt / 3624 nt ) ZYRO0G10252g - Chr7 (819658..822768) - similar to uniprot|P12383 Saccharomyces cerevisiae YGL013C PDR1 Zinc cluster protein that is a master regulator involved in recruiting other zinc cluster proteins to pleiotropic drug response elements (PDREs) to fine tune the regulation of multidrug resistance genes Click for BLAST results 94% of length of longest homolog ( 2901 nt / 3090 nt ) Click for intergenic sequence ZYRO0C14938g - Chr3 complement(1159657..1162557) - similar to uniprot|P39112 Saccharomyces cerevisiae YMR287C MSU1 RNase component of the mitochondrial degradosome along with the ATP-dependent RNA helicase Suv3p the degradosome associates with the ribosome and mediates turnover of aberrant or unprocessed RNAs Click for BLAST results 86% of length of longest homolog ( 1524 nt / 1770 nt ) Click for intergenic sequence Click for intergenic sequence ZYRO0C14960g - Chr3 (1164443..1165966) - highly similar to uniprot|P32340 Saccharomyces cerevisiae YML120C NDI1 NADH:ubiquinone oxidoreductase transfers electrons from NADH to ubiquinone in the respiratory chain but does not pump protons in contrast to the higher eukaryotic multisubunit respiratory complex I which is absent in S. cerevisiae Click for BLAST results 97% of length of longest homolog ( 855 nt / 879 nt ) Click for intergenic sequence Click for intergenic sequence ZYRO0C14982g - Chr3 complement(1166132..1166986) - highly similar to uniprot|P53941 Saccharomyces cerevisiae YNL075W IMP4 Component of the SSU processome which is required for pre-18S rRNA processing interacts with Mpp10p member of a superfamily of proteins that contain a sigma(70)-like motif and associate with RNAs Click for BLAST results 57% of length of longest homolog ( 1233 nt / 2181 nt ) Click for intergenic sequence Click for intergenic sequence ZYRO0C15004g - Chr3 complement(1167173..1168405) - some similarities with uniprot|P34072 Saccharomyces cerevisiae YNL076W MKS1 Pleiotropic regulatory factor involved in Ras-CAMP and lysine biosynthetic pathways and nitrogen regulation involved in retrograde (RTG) mitochondria-to-nucleus signaling Click for BLAST results Click for intergenic sequence 59% of length of longest homolog ( 255 nt / 432 nt ) Click for intergenic sequence Click for intergenic sequence TDEL0A01660 - Chr1 complement(299385..299639) - Anc_6.142 YBR233W-A Click for BLAST results 97% of length of longest homolog ( 1143 nt / 1176 nt ) Click for intergenic sequence Click for intergenic sequence TDEL0A01650 - Chr1 (298190..299332) - Anc_6.143 YBR234C Click for BLAST results 90% of length of longest homolog ( 1335 nt / 1491 nt ) Click for intergenic sequence Click for intergenic sequence TDEL0A01640 - Chr1 complement(296607..297941) - Anc_6.144 YGL111W Click for BLAST results 87% of length of longest homolog ( 1806 nt / 2070 nt ) Click for intergenic sequence TDEL0A01630 - Chr1 (294729..296534) - Anc_6.145 YGL110C Click for BLAST results 90% of length of longest homolog ( 77 nt / 86 nt ) contains intron(s) Click for intergenic sequence TDEL0Btrna6Y - Chr2 (35039..35078,35087..35123) - tRNA Type: Tyr (Y) Click for intergenic sequence Click for intergenic sequence 90% of length of longest homolog ( 1749 nt / 1947 nt ) Click for intergenic sequence Click for intergenic sequence TDEL0B00180 - Chr2 (35263..37011) - Anc_8.849 YMR284W Click for BLAST results 87% of length of longest homolog ( 1479 nt / 1707 nt ) Click for intergenic sequence Click for intergenic sequence TDEL0B00190 - Chr2 complement(37032..38510) - Anc_8.850 YMR285C Click for BLAST results 93% of length of longest homolog ( 261 nt / 282 nt ) Click for intergenic sequence Click for intergenic sequence TDEL0B00200 - Chr2 (38779..39039) - Anc_8.851 YMR286W Click for BLAST results 64% of length of longest homolog ( 1002 nt / 1560 nt ) Click for intergenic sequence TDEL0B00210 - Chr2 complement(39137..40138) - Anc_8.852 YML119W Click for BLAST results 90% of length of longest homolog ( 3261 nt / 3624 nt ) TDEL0F02330 - Chr6 complement(429974..433234) - Anc_4.113 YGL013C Click for BLAST results 91% of length of longest homolog ( 2808 nt / 3090 nt ) Click for intergenic sequence TDEL0B00220 - Chr2 complement(40373..43180) - Anc_8.853 YMR287C Click for BLAST results 89% of length of longest homolog ( 1575 nt / 1770 nt ) Click for intergenic sequence TDEL0B00230 - Chr2 (44573..46147) - Anc_8.854 YML120C Click for BLAST results 99% of length of longest homolog ( 867 nt / 879 nt ) Click for intergenic sequence TDEL0C04380 - Chr3 (783826..784692) - Anc_2.221 YNL075W Click for BLAST results 69% of length of longest homolog ( 1494 nt / 2181 nt ) Click for intergenic sequence Click for intergenic sequence TDEL0C04370 - Chr3 (782183..783676) - Anc_2.220 YNL076W Click for BLAST results Click for intergenic sequence 60% of length of longest homolog ( 258 nt / 432 nt ) Click for intergenic sequence Click for intergenic sequence KLLA0F10637g - Chr6 complement(979795..980052) - similar to uniprot|P69850 Saccharomyces cerevisiae YBR233W-A DAD3 Essential protein component of the DASH complex involved in spindle integrity and kinetochore function interacts with Duo1p and Dam1p localizes to intranuclear spindles and kinetochore Click for BLAST results 95% of length of longest homolog ( 1113 nt / 1176 nt ) Click for intergenic sequence Click for intergenic sequence KLLA0F10615g - Chr6 (978492..979604) - highly similar to uniprot|Q754U3 Ashbya gossypii AFL022W AFL022Wp and similar to YBR234C uniprot|P38328 Saccharomyces cerevisiae YBR234C ARC40 Essential subunit of the ARP2/3 complex which is required for the motility and integrity of cortical actin patches Click for BLAST results 88% of length of longest homolog ( 1311 nt / 1491 nt ) Click for intergenic sequence Click for intergenic sequence KLLA0F10593g - Chr6 complement(976698..978008) - similar to uniprot|P53136 Saccharomyces cerevisiae YGL111W NSA1 Constituent of 66S pre-ribosomal particles involved in 60S ribosomal subunit biogenesis Click for BLAST results 91% of length of longest homolog ( 1884 nt / 2070 nt ) Click for intergenic sequence KLLA0F10571g - Chr6 (974719..976602) - similar to uniprot|P53137 Saccharomyces cerevisiae YGL110C CUE3 Protein of unknown function has a CUE domain that binds ubiquitin which may facilitate intramolecular monoubiquitination Click for BLAST results 91% of length of longest homolog ( 1779 nt / 1947 nt ) Click for intergenic sequence KLLA0C06226g - Chr3 (550683..552461) - similar to uniprot|P32807 Saccharomyces cerevisiae YMR284W YKU70 Forms heterodimer with Yku80p known as Ku binds chromosome ends and is involved in maintaining normal telomere length and structure in addition to participating in the formation of silent chromatin at telomere-proximal genes Click for BLAST results 91% of length of longest homolog ( 1551 nt / 1707 nt ) Click for intergenic sequence Click for intergenic sequence KLLA0C06248g - Chr3 complement(552493..554043) - similar to uniprot|Q03264 Saccharomyces cerevisiae YMR285C Click for BLAST results 90% of length of longest homolog ( 255 nt / 282 nt ) Click for intergenic sequence Click for intergenic sequence KLLA0C06270g - Chr3 (554658..554912) - highly similar to uniprot|P20084 Saccharomyces cerevisiae YMR286W MRPL33 Mitochondrial ribosomal protein of the large subunit Click for BLAST results 49% of length of longest homolog ( 771 nt / 1560 nt ) Click for intergenic sequence KLLA0C06292g - Chr3 complement(555112..555882) - some similarities with uniprot|Q03208 Saccharomyces cerevisiae YML119W Click for BLAST results 90% of length of longest homolog ( 3249 nt / 3624 nt ) KLLA0A09119g - Chr1 complement(797533..800781) - weakly similar to uniprot|P12383 Saccharomyces cerevisiae YGL013C PDR1 Zinc cluster protein that is a master regulator involved in recruiting other zinc cluster proteins to pleiotropic drug response elements (PDREs) to fine tune the regulation of multidrug resistance genes Click for BLAST results 96% of length of longest homolog ( 2952 nt / 3090 nt ) Click for intergenic sequence KLLA0C06314g - Chr3 complement(556468..559419) - similar to uniprot|P39112 Saccharomyces cerevisiae YMR287C MSU1 RNase component of the mitochondrial degradosome along with the ATP-dependent RNA helicase Suv3p the degradosome associates with the ribosome and mediates turnover of aberrant or unprocessed RNAs Click for BLAST results 88% of length of longest homolog ( 1560 nt / 1770 nt ) Click for intergenic sequence KLLA0C06336g - Chr3 (561371..562930) - highly similar to uniprot|P32340 Saccharomyces cerevisiae YML120C NDI1 NADH:ubiquinone oxidoreductase transfers electrons from NADH to ubiquinone in the respiratory chain but does not pump protons in contrast to the higher eukaryotic multisubunit respiratory complex I which is absent in S. cerevisiae Click for BLAST results 97% of length of longest homolog ( 852 nt / 879 nt ) Click for intergenic sequence KLLA0E07833g - Chr5 complement(701193..702044) - highly similar to uniprot|P53941 Saccharomyces cerevisiae YNL075W IMP4 Component of the SSU processome which is required for pre-18S rRNA processing interacts with Mpp10p member of a superfamily of proteins that contain a sigma(70)-like motif and associate with RNAs Click for BLAST results 91% of length of longest homolog ( 1995 nt / 2181 nt ) Click for intergenic sequence Click for intergenic sequence KLLA0E07855g - Chr5 complement(702486..704480) - weakly similar to uniprot|P34072 Saccharomyces cerevisiae YNL076W MKS1 Pleiotropic regulatory factor involved in Ras-CAMP and lysine biosynthetic pathways and nitrogen regulation involved in retrograde (RTG) mitochondria-to-nucleus signaling Click for BLAST results Click for intergenic sequence 60% of length of longest homolog ( 258 nt / 432 nt ) Click for intergenic sequence Click for intergenic sequence AFL021C - Chr6 complement(398510..398767) - Syntenic homolog of Saccharomyces cerevisiae YBR233W-A (DAD3) Click for BLAST results 95% of length of longest homolog ( 1116 nt / 1176 nt ) Click for intergenic sequence Click for intergenic sequence AFL022W - Chr6 (397359..398474) - Syntenic homolog of Saccharomyces cerevisiae YBR234C (ARC40) Click for BLAST results 88% of length of longest homolog ( 1308 nt / 1491 nt ) Click for intergenic sequence Click for intergenic sequence AFL023C - Chr6 complement(395806..397113) - Syntenic homolog of Saccharomyces cerevisiae YGL111W (NSA1) Click for BLAST results 87% of length of longest homolog ( 1797 nt / 2070 nt ) Click for intergenic sequence AFL024W - Chr6 (393932..395728) - Syntenic homolog of Saccharomyces cerevisiae YGL110C (CUE3) Click for BLAST results 95% of length of longest homolog ( 1635 nt / 1725 nt ) contains intron(s) Click for intergenic sequence ABL116C - Chr2 complement(181138..181889,181944..182826) - Syntenic homolog of Saccharomyces cerevisiae YDL210W (UGA4); 1-intron Click for BLAST results Click for intergenic sequence 93% of length of longest homolog ( 1809 nt / 1947 nt ) Click for intergenic sequence Click for intergenic sequence ABL117C - Chr2 complement(179060..180868) - Syntenic homolog of Saccharomyces cerevisiae YMR284W (YKU70) Click for BLAST results 89% of length of longest homolog ( 1515 nt / 1707 nt ) Click for intergenic sequence ABL118W - Chr2 (177531..179045) - Syntenic homolog of Saccharomyces cerevisiae YMR285C (NGL2) and YML118W (NGL3) Click for BLAST results 90% of length of longest homolog ( 255 nt / 282 nt ) Click for intergenic sequence AFR450C - Chr6 complement(1248240..1248494) - Syntenic homolog of Saccharomyces cerevisiae YMR286W (MRPL33) Click for BLAST results 58% of length of longest homolog ( 900 nt / 1560 nt ) Click for intergenic sequence Click for intergenic sequence AFR449W - Chr6 (1247197..1248096) - Syntenic homolog of Saccharomyces cerevisiae YML119W Click for BLAST results Click for intergenic sequence 79% of length of longest homolog ( 2454 nt / 3090 nt ) Click for intergenic sequence Click for intergenic sequence AFR448W - Chr6 (1244187..1246640) - Syntenic homolog of Saccharomyces cerevisiae YMR287C (MSU1) Click for BLAST results 88% of length of longest homolog ( 1560 nt / 1770 nt ) Click for intergenic sequence AFR447C - Chr6 complement(1241817..1243376) - Syntenic homolog of Saccharomyces cerevisiae YML120C (NDI1) Click for BLAST results 97% of length of longest homolog ( 852 nt / 879 nt ) Click for intergenic sequence AER430W - Chr5 (1462533..1463384) - Syntenic homolog of Saccharomyces cerevisiae YNL075W (IMP4) Click for BLAST results 66% of length of longest homolog ( 1446 nt / 2181 nt ) Click for intergenic sequence Click for intergenic sequence AER429W - Chr5 (1460736..1462181) - Syntenic homolog of Saccharomyces cerevisiae YNL076W (MKS1) Click for BLAST results Click for intergenic sequence 56% of length of longest homolog ( 243 nt / 432 nt ) Click for intergenic sequence Click for intergenic sequence Ecym_2275 - Chr2 complement(540705..540947) - similar to Ashbya gossypii AFL021C Click for BLAST results 96% of length of longest homolog ( 1125 nt / 1176 nt ) Click for intergenic sequence Click for intergenic sequence Ecym_2274 - Chr2 (539468..540592) - similar to Ashbya gossypii AFL022W Click for BLAST results 87% of length of longest homolog ( 1302 nt / 1491 nt ) Click for intergenic sequence Click for intergenic sequence Ecym_2273 - Chr2 complement(537871..539172) - similar to Ashbya gossypii AFL023C Click for BLAST results 87% of length of longest homolog ( 1809 nt / 2070 nt ) Click for intergenic sequence Ecym_2272 - Chr2 (535967..537775) - similar to Ashbya gossypii AFL024W Click for BLAST results 87% of length of longest homolog ( 75 nt / 86 nt ) contains intron(s) Click for intergenic sequence Ecym_4.trna21Y - Chr4 complement(1218198..1218233,1218249..1218287) - tRNA-Tyr; Ecym_4622 100% of length of longest homolog ( 1719 nt / 1725 nt ) Click for intergenic sequence Click for intergenic sequence Ecym_4621 - Chr4 complement(1216034..1217752) - similar to Ashbya gossypii ABL116C Click for BLAST results Click for intergenic sequence 92% of length of longest homolog ( 1794 nt / 1947 nt ) Click for intergenic sequence Click for intergenic sequence Ecym_4620 - Chr4 complement(1213899..1215692) - similar to Ashbya gossypii ABL117C Click for BLAST results 86% of length of longest homolog ( 1464 nt / 1707 nt ) Click for intergenic sequence Ecym_4619 - Chr4 (1212417..1213880) - similar to Ashbya gossypii ABL118W Click for BLAST results 90% of length of longest homolog ( 255 nt / 282 nt ) Ecym_4624 - Chr4 (1221125..1221379) - similar to Ashbya gossypii AFR450C Click for BLAST results 78% of length of longest homolog ( 2832 nt / 3624 nt ) Ecym_7235 - Chr7 (489574..492405) - similar to Saccharomyces cerevisiae YBL005W Click for BLAST results 90% of length of longest homolog ( 1593 nt / 1770 nt ) Ecym_1393 - Chr1 complement(815036..816628) - similar to Ashbya gossypii AFR447C Click for BLAST results 97% of length of longest homolog ( 852 nt / 879 nt ) Click for intergenic sequence Ecym_5387 - Chr5 (788656..789507) - similar to Ashbya gossypii AER430W Click for BLAST results 87% of length of longest homolog ( 1908 nt / 2181 nt ) Click for intergenic sequence Click for intergenic sequence Ecym_5386 - Chr5 (786277..788184) - similar to Ashbya gossypii AER429W Click for BLAST results Click for intergenic sequence 57% of length of longest homolog ( 246 nt / 432 nt ) Click for intergenic sequence Click for intergenic sequence SAKL0A06336g - Chr1 complement(572781..573026) - similar to uniprot|P69850 Saccharomyces cerevisiae YBR233W-A DAD3 Essential protein component of the DASH complex involved in spindle integrity and kinetochore function interacts with Duo1p and Dam1p localizes to intranuclear spindles and kinetochore Click for BLAST results 95% of length of longest homolog ( 1122 nt / 1176 nt ) Click for intergenic sequence Click for intergenic sequence SAKL0A06314g - Chr1 (571580..572701) - highly similar to uniprot|P38328 Saccharomyces cerevisiae YBR234C ARC40 Essential subunit of the ARP2/3 complex which is required for the motility and integrity of cortical actin patches Click for BLAST results 91% of length of longest homolog ( 1350 nt / 1491 nt ) Click for intergenic sequence Click for intergenic sequence SAKL0A06292g - Chr1 complement(569971..571320) - similar to uniprot|P53136 Saccharomyces cerevisiae YGL111W NSA1 Constituent of 66S pre-ribosomal particles involved in 60S ribosomal subunit biogenesis Click for BLAST results 89% of length of longest homolog ( 1851 nt / 2070 nt ) Click for intergenic sequence SAKL0A06270g - Chr1 (568021..569871) - similar to uniprot|P53137 Saccharomyces cerevisiae YGL110C CUE3 Protein of unknown function has a CUE domain that binds ubiquitin which may facilitate intramolecular monoubiquitination Click for BLAST results 100% of length of longest homolog ( 1725 nt / 1725 nt ) Click for intergenic sequence SAKL0D01232g - Chr4 complement(90918..92642) - similar to uniprot|P32837 Saccharomyces cerevisiae YDL210W UGA4 Permease that serves as a gamma-aminobutyrate (GABA) transport protein involved in the utilization of GABA as a nitrogen source catalyzes the transport of putrescine and delta-aminolevulinic acid (ALA) localized to the vacuolar membrane Click for BLAST results 100% of length of longest homolog ( 291 nt / 291 nt ) Click for intergenic sequence Click for intergenic sequence SAKL0D01210g - Chr4 complement(89856..90146) - some similarities with uniprot|P38363 Saccharomyces cerevisiae YML132W COS3 Protein involved in salt resistance interacts with sodium:hydrogen antiporter Nha1p member of a family of conserved often subtelomerically- encoded proteins Click for BLAST results 90% of length of longest homolog ( 1746 nt / 1947 nt ) Click for intergenic sequence Click for intergenic sequence SAKL0D01188g - Chr4 complement(87783..89528) - similar to uniprot|P32807 Saccharomyces cerevisiae YMR284W YKU70 Forms heterodimer with Yku80p known as Ku binds chromosome ends and is involved in maintaining normal telomere length and structure in addition to participating in the formation of silent chromatin at telomere-proximal genes Click for BLAST results 89% of length of longest homolog ( 1518 nt / 1707 nt ) Click for intergenic sequence Click for intergenic sequence SAKL0D01166g - Chr4 (86218..87735) - similar to uniprot|Q03264 Saccharomyces cerevisiae YMR285C Click for BLAST results 90% of length of longest homolog ( 255 nt / 282 nt ) Click for intergenic sequence Click for intergenic sequence SAKL0D01144g - Chr4 complement(85723..85977) - highly similar to uniprot|P20084 Saccharomyces cerevisiae YMR286W MRPL33 Mitochondrial ribosomal protein of the large subunit Click for BLAST results 60% of length of longest homolog ( 936 nt / 1560 nt ) Click for intergenic sequence Click for intergenic sequence SAKL0D01122g - Chr4 (84647..85582) - conserved hypothetical protein Click for BLAST results 78% of length of longest homolog ( 2823 nt / 3624 nt ) Click for intergenic sequence Click for intergenic sequence SAKL0D01100g - Chr4 complement(81235..84057) - weakly similar to uniprot|P33200 Saccharomyces cerevisiae YBL005W PDR3 Transcriptional activator of the pleiotropic drug resistance network regulates expression of ATP-binding cassette (ABC) transporters through binding to cis-acting sites known as PDREs (PDR responsive elements) Click for BLAST results 91% of length of longest homolog ( 2811 nt / 3090 nt ) Click for intergenic sequence Click for intergenic sequence SAKL0D01078g - Chr4 (78360..81170) - similar to uniprot|P39112 Saccharomyces cerevisiae YMR287C MSU1 RNase component of the mitochondrial degradosome along with the ATP-dependent RNA helicase Suv3p the degradosome associates with the ribosome and mediates turnover of aberrant or unprocessed RNAs Click for BLAST results 87% of length of longest homolog ( 1542 nt / 1770 nt ) Click for intergenic sequence SAKL0D01056g - Chr4 complement(76283..77824) - highly similar to uniprot|P32340 Saccharomyces cerevisiae YML120C NDI1 NADH:ubiquinone oxidoreductase transfers electrons from NADH to ubiquinone in the respiratory chain but does not pump protons in contrast to the higher eukaryotic multisubunit respiratory complex I which is absent in S. cerevisiae Click for BLAST results 97% of length of longest homolog ( 852 nt / 879 nt ) Click for intergenic sequence SAKL0E09240g - Chr5 complement(767385..768236) - highly similar to uniprot|P53941 Saccharomyces cerevisiae YNL075W IMP4 Component of the SSU processome which is required for pre-18S rRNA processing interacts with Mpp10p member of a superfamily of proteins that contain a sigma(70)-like motif and associate with RNAs Click for BLAST results 91% of length of longest homolog ( 1977 nt / 2181 nt ) Click for intergenic sequence Click for intergenic sequence SAKL0E09262g - Chr5 complement(768520..770496) - weakly similar to uniprot|P34072 Saccharomyces cerevisiae YNL076W MKS1 Pleiotropic regulatory factor involved in Ras-CAMP and lysine biosynthetic pathways and nitrogen regulation involved in retrograde (RTG) mitochondria-to-nucleus signaling Click for BLAST results Click for intergenic sequence 57% of length of longest homolog ( 246 nt / 432 nt ) Click for intergenic sequence Click for intergenic sequence KLTH0H05984g - Chr8 complement(527082..527327) - similar to uniprot|P69850 Saccharomyces cerevisiae YBR233W-A DAD3 Essential protein component of the DASH complex involved in spindle integrity and kinetochore function interacts with Duo1p and Dam1p localizes to intranuclear spindles and kinetochore Click for BLAST results 95% of length of longest homolog ( 1122 nt / 1176 nt ) Click for intergenic sequence Click for intergenic sequence KLTH0H05962g - Chr8 (525898..527019) - highly similar to uniprot|P38328 Saccharomyces cerevisiae YBR234C ARC40 Essential subunit of the ARP2/3 complex which is required for the motility and integrity of cortical actin patches Click for BLAST results 90% of length of longest homolog ( 1335 nt / 1491 nt ) Click for intergenic sequence Click for intergenic sequence KLTH0H05940g - Chr8 complement(523846..525180) - similar to uniprot|P53136 Saccharomyces cerevisiae YGL111W NSA1 Constituent of 66S pre-ribosomal particles involved in 60S ribosomal subunit biogenesis Click for BLAST results 87% of length of longest homolog ( 1800 nt / 2070 nt ) Click for intergenic sequence KLTH0H05918g - Chr8 (521968..523767) - similar to uniprot|P53137 Saccharomyces cerevisiae YGL110C CUE3 Protein of unknown function has a CUE domain that binds ubiquitin which may facilitate intramolecular monoubiquitination Click for BLAST results 89% of length of longest homolog ( 1737 nt / 1947 nt ) Click for intergenic sequence KLTH0C03586g - Chr3 (311969..313705) - similar to uniprot|P32807 Saccharomyces cerevisiae YMR284W YKU70 Forms heterodimer with Yku80p known as Ku binds chromosome ends and is involved in maintaining normal telomere length and structure in addition to participating in the formation of silent chromatin at telomere-proximal genes Click for BLAST results 87% of length of longest homolog ( 1488 nt / 1707 nt ) Click for intergenic sequence Click for intergenic sequence KLTH0C03608g - Chr3 complement(313729..315216) - similar to uniprot|Q03264 Saccharomyces cerevisiae YMR285C Click for BLAST results 90% of length of longest homolog ( 255 nt / 282 nt ) Click for intergenic sequence Click for intergenic sequence KLTH0C03630g - Chr3 (315520..315774) - similar to uniprot|P20084 Saccharomyces cerevisiae YMR286W MRPL33 Mitochondrial ribosomal protein of the large subunit Click for BLAST results 53% of length of longest homolog ( 831 nt / 1560 nt ) Click for intergenic sequence KLTH0C03652g - Chr3 complement(315850..316680) - conserved hypothetical protein Click for BLAST results 78% of length of longest homolog ( 2817 nt / 3624 nt ) KLTH0E07854g - Chr5 (719642..722458) - weakly similar to uniprot|P12383 Saccharomyces cerevisiae YGL013C PDR1 Zinc cluster protein that is a master regulator involved in recruiting other zinc cluster proteins to pleiotropic drug response elements (PDREs) to fine tune the regulation of multidrug resistance genes Click for BLAST results 92% of length of longest homolog ( 2847 nt / 3090 nt ) KLTH0C03674g - Chr3 complement(317119..319965) - similar to uniprot|P39112 Saccharomyces cerevisiae YMR287C MSU1 RNase component of the mitochondrial degradosome along with the ATP-dependent RNA helicase Suv3p the degradosome associates with the ribosome and mediates turnover of aberrant or unprocessed RNAs Click for BLAST results 88% of length of longest homolog ( 1551 nt / 1770 nt ) KLTH0F06974g - Chr6 complement(608833..610383) - similar to uniprot|P32340 Saccharomyces cerevisiae YML120C NDI1 NADH:ubiquinone oxidoreductase transfers electrons from NADH to ubiquinone in the respiratory chain but does not pump protons in contrast to the higher eukaryotic multisubunit respiratory complex I which is absent in S. cerevisiae Click for BLAST results 97% of length of longest homolog ( 852 nt / 879 nt ) Click for intergenic sequence KLTH0G08866g - Chr7 (727640..728491) - highly similar to uniprot|P53941 Saccharomyces cerevisiae YNL075W IMP4 Component of the SSU processome which is required for pre-18S rRNA processing interacts with Mpp10p member of a superfamily of proteins that contain a sigma(70)-like motif and associate with RNAs Click for BLAST results 80% of length of longest homolog ( 1749 nt / 2181 nt ) Click for intergenic sequence Click for intergenic sequence KLTH0G08844g - Chr7 (725516..727264) - weakly similar to uniprot|P34072 Saccharomyces cerevisiae YNL076W MKS1 Pleiotropic regulatory factor involved in Ras-CAMP and lysine biosynthetic pathways and nitrogen regulation involved in retrograde (RTG) mitochondria-to-nucleus signaling Click for BLAST results Click for intergenic sequence 55% of length of longest homolog ( 237 nt / 432 nt ) Click for intergenic sequence Click for intergenic sequence Kwal_14.1678 - s14 complement(420289..420525) - YBR233W-A (DAD3) - Hypothetical ORF identified by homology. See FEBS Letters [2000] 487:31-36. [contig 237] FULL Click for BLAST results 95% of length of longest homolog ( 1122 nt / 1176 nt ) Click for intergenic sequence Click for intergenic sequence Kwal_14.1675 - s14 (419094..420215) - YBR234C (ARC40) - component of Arp2/Arp3 protein complex [contig 237] FULL Click for BLAST results 89% of length of longest homolog ( 1332 nt / 1491 nt ) Click for intergenic sequence Click for intergenic sequence Kwal_14.1671 - s14 complement(416504..417835) - YGL111W (NSA1) - ribosome biogenesis protein [contig 237] FULL Click for BLAST results 87% of length of longest homolog ( 1800 nt / 2070 nt ) Click for intergenic sequence Kwal_14.1670 - s14 (414643..416442) - YGL110C - Hypothetical ORF [contig 237] FULL Click for BLAST results 88% of length of longest homolog ( 1719 nt / 1947 nt ) Click for intergenic sequence Kwal_27.10199 - s27 (238096..239814) - YMR284W (YKU70) - DNA binding protein [contig 39] FULL Click for BLAST results 87% of length of longest homolog ( 1485 nt / 1707 nt ) Click for intergenic sequence Click for intergenic sequence Kwal_27.10204 - s27 complement(239835..241319) - YMR285C (NGL2) - DNase/RNase (putative); CCR4 C-terminal homolog; displays homology to drosophila Angelgene; homolog to ngl1 and ngl3  [contig 39] FULL Click for BLAST results 90% of length of longest homolog ( 255 nt / 282 nt ) Click for intergenic sequence Click for intergenic sequence Kwal_27.10209 - s27 (241628..241882) - YMR286W (MRPL33) - Mitochondrial ribosomal protein MRPL33 (YmL33) (E. coli L30) [contig 39] FULL Click for BLAST results 54% of length of longest homolog ( 837 nt / 1560 nt ) Click for intergenic sequence Kwal_27.10210 - s27 complement(241952..242788) - YML119W - Hypothetical ORF [contig 39] FULL Click for BLAST results 77% of length of longest homolog ( 2775 nt / 3624 nt ) Kwal_47.17506 - s47 (431921..434695) - YGL013C (PDR1) - zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type [contig 207] FULL Click for BLAST results 91% of length of longest homolog ( 2811 nt / 3090 nt ) Kwal_27.10213 - s27 complement(243200..246010) - YMR287C (MSU1) - component of 3'-5'exonuclease complex [contig 39] FULL Click for BLAST results 88% of length of longest homolog ( 1551 nt / 1770 nt ) Kwal_33.14300 - s33 complement(609687..611237) - YML120C (NDI1) - NADH dehydrogenase (ubiquinone) [contig 104] FULL Click for BLAST results 97% of length of longest homolog ( 852 nt / 879 nt ) Click for intergenic sequence Kwal_23.3092 - s23 (152758..153609) - YNL075W (IMP4) - Interacts With Mpp10. Imp4p is a specific component of the U3 snoRNP and is required for pre-18S rRNA processing. [contig 248] FULL Click for BLAST results 81% of length of longest homolog ( 1767 nt / 2181 nt ) Click for intergenic sequence Click for intergenic sequence Kwal_23.3087 - s23 (150757..152523) - YNL076W (MKS1) - negative regulator of Ras cAMP pathway, shares weak homology with Spt2p [contig 248] FULL Click for BLAST results Click for intergenic sequence 66% of length of longest homolog ( 285 nt / 432 nt ) Click for intergenic sequence YBR233W-A (DAD3) - Chr2 (684977..685261) - Essential subunit of the Dam1 complex (aka DASH complex), couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; is transferred to the kinetochore prior to mitosis Click for Info Click for BLAST results 98% of length of longest homolog ( 1155 nt / 1176 nt ) Click for intergenic sequence YBR234C (ARC40) - Chr2 complement(685438..686592) - Subunit of the ARP2/3 complex, which is required for the motility and integrity of cortical actin patches Click for Info Click for BLAST results 87% of length of longest homolog ( 75 nt / 86 nt ) contains intron(s) Click for intergenic sequence Scer_13.trna21Y - Chr13 (837928..837966,837981..838016) - Tyrosine tRNA (tRNA-Tyr), predicted by tRNAscan-SE analysis; can mutate to suppress ochre nonsense mutations; tRNA Type: Tyr (Y) | Anti-Codon: GUA | Cove Score: 68.18 Click for intergenic sequence Click for intergenic sequence 93% of length of longest homolog ( 1809 nt / 1947 nt ) Click for intergenic sequence Click for intergenic sequence YMR284W (YKU70) - Chr13 (838187..839995) - Subunit of the telomeric Ku complex (Yku70p-Yku80p), involved in telomere length maintenance, structure and telomere position effect; relocates to sites of double-strand cleavage to promote nonhomologous end joining during DSB repair Click for Info Click for BLAST results 91% of length of longest homolog ( 1548 nt / 1707 nt ) Click for intergenic sequence Click for intergenic sequence YMR285C (NGL2) - Chr13 complement(840144..841691) - Protein involved in 5.8S rRNA processing; Ccr4p-like RNase required for correct 3'-end formation of 5.8S rRNA at site E; similar to Ngl1p and Ngl3p Click for Info Click for BLAST results 93% of length of longest homolog ( 261 nt / 282 nt ) Click for intergenic sequence YMR286W (MRPL33) - Chr13 (841942..842202) - Mitochondrial ribosomal protein of the large subunit Click for Info Click for BLAST results 81% of length of longest homolog ( 2931 nt / 3624 nt ) YBL005W (PDR3) - Chr2 (217470..220400) - Transcriptional activator of the pleiotropic drug resistance network, regulates expression of ATP-binding cassette (ABC) transporters through binding to cis-acting sites known as PDREs (PDR responsive elements); post-translationally up-regulated in cells lacking a functional mitochondrial genome Click for Info Click for BLAST results 94% of length of longest homolog ( 2910 nt / 3090 nt ) YMR287C (DSS1) - Chr13 complement(842436..845345) - 3'-5' exoribonuclease, component of the mitochondrial degradosome along with the ATP-dependent RNA helicase Suv3p; the degradosome associates with the ribosome and mediates turnover of aberrant or unprocessed RNAs Click for Info Click for BLAST results 64% of length of longest homolog ( 276 nt / 432 nt ) Click for intergenic sequence Smik_2.376 - Chr2 (671108..671383) - YBR233W-A (REAL) Click for BLAST results 98% of length of longest homolog ( 1155 nt / 1176 nt ) Click for intergenic sequence Smik_2.377 - Chr2 complement(671569..672723) - YBR234C (REAL) Click for BLAST results 90% of length of longest homolog ( 77 nt / 86 nt ) contains intron(s) Click for intergenic sequence Smik_13.trna499Y - Chr13 (820469..820508,820521..820557) - tRNA Type: Tyr(Y) | Anti-Codon: GUA Click for intergenic sequence Click for intergenic sequence 93% of length of longest homolog ( 1809 nt / 1947 nt ) Click for intergenic sequence Click for intergenic sequence Smik_13.500 - Chr13 (820721..822529) - YMR284W (REAL) Click for BLAST results 91% of length of longest homolog ( 1548 nt / 1707 nt ) Click for intergenic sequence Click for intergenic sequence Smik_13.501 - Chr13 complement(822672..824219) - YMR285C (REAL) Click for BLAST results 89% of length of longest homolog ( 252 nt / 282 nt ) Click for intergenic sequence Smik_13.502 - Chr13 (824481..824732) - YMR286W (REAL) Click for BLAST results 80% of length of longest homolog ( 2916 nt / 3624 nt ) Smik_2.115 - Chr2 (210321..213236) - YBL005W (REAL) Click for BLAST results 94% of length of longest homolog ( 2910 nt / 3090 nt ) Smik_13.503 - Chr13 complement(825111..828020) - YMR287C (REAL) Click for BLAST results 58% of length of longest homolog ( 249 nt / 432 nt ) Click for intergenic sequence Skud_2.365 - Chr2 (653696..653944) - YBR233W-A (REAL) Click for BLAST results 98% of length of longest homolog ( 1155 nt / 1176 nt ) Click for intergenic sequence Skud_2.366 - Chr2 complement(654186..655340) - YBR234C (REAL) Click for BLAST results 90% of length of longest homolog ( 77 nt / 86 nt ) contains intron(s) Click for intergenic sequence Skud_13.trna456Y - Chr13 (811474..811513,811526..811562) - tRNA Type: Tyr(Y) | Anti-Codon: GUA Click for intergenic sequence Click for intergenic sequence 93% of length of longest homolog ( 1809 nt / 1947 nt ) Click for intergenic sequence Click for intergenic sequence Skud_13.457 - Chr13 (811730..813538) - YMR284W (REAL) Click for BLAST results 91% of length of longest homolog ( 1545 nt / 1707 nt ) Click for intergenic sequence Click for intergenic sequence Skud_13.458 - Chr13 complement(813694..815238) - YMR285C (REAL)