Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA nucleotide sequences for this column Click for multiple sequence alignment for this column Click for FASTA nucleotide sequences for this column Click for multiple sequence alignment for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA nucleotide sequences for this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Email Kevin Byrne Wolfe Laboratory Website Click for information on the species in YGOB Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 91% of length of longest homolog ( 3150 nt / 3453 nt ) Click for intergenic sequence TPHA0D04210 - Chr4 (908861..912010) - Anc_3.485 YGR125W Click for BLAST results Click for intergenic sequence 100% of length of longest homolog ( 312 nt / 312 nt ) Click for intergenic sequence Click for intergenic sequence TPHA0D04205 - Chr4 complement(906686..906997) Click for BLAST results 99% of length of longest homolog ( 1725 nt / 1743 nt ) Click for intergenic sequence Click for intergenic sequence TPHA0D04200 - Chr4 (904705..906429) - Anc_3.483 YPR145W Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence TPHA0Dtrna8I - Chr4 (902814..902887) - tRNA Type: Ile (I) Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence NDAI0Ltrna2N - Chr7 complement(214014..214087) - tRNA Type: Asn (N) 92% of length of longest homolog ( 3165 nt / 3453 nt ) Click for intergenic sequence NDAI0G00990 - Chr7 complement(205221..208385) - Anc_3.485 YGR125W Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence NDAI0Ltrna5I - Chr7 complement(209680..209753) - tRNA Type: Ile (I) Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Click for intergenic sequence NCAS0Etrna10N - Chr5 (171063..171136) - tRNA Type: Asn (N) 91% of length of longest homolog ( 3159 nt / 3453 nt ) Click for intergenic sequence Click for intergenic sequence NCAS0E00950 - Chr5 complement(171346..174504) - Anc_3.485 YGR125W Click for BLAST results 100% of length of longest homolog ( 663 nt / 663 nt ) Click for intergenic sequence Click for intergenic sequence NCAS0E00960 - Chr5 complement(175939..176601) -  Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence NCAS0Etrna13I - Chr5 complement(177709..177782) - tRNA Type: Ile (I) 95% of length of longest homolog ( 3267 nt / 3453 nt ) KNAG0B00860 - Chr2 complement(156225..159491) - Anc_3.485 YGR125W Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence KAFR0Ctrna9N - Chr3 complement(453056..453129) - tRNA Type: Asn (N) 89% of length of longest homolog ( 3063 nt / 3453 nt ) Click for intergenic sequence KAFR0C01910 - Chr3 (382140..385202) - Anc_3.485 YGR125W Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence KAFR0Ctrna13I - Chr3 (380766..380839) - tRNA Type: Ile (I) 69% of length of longest homolog ( 216 nt / 312 nt ) Click for intergenic sequence Cgla_YGOB_Anc_3.484 - Chr12 (935434..935649) - ANNOTATED BY YGOB - Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Cgla_12.trna14I - Chr12 complement(936615..936688) - tRNA Type: Ile (I) | Anti-Codon: AAU | Cove Score: 71.40 Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Suva_7.trna404N - Chr7 (702177..702250) - tRNA Type: Asn(N) | Anti-Codon: GUU 90% of length of longest homolog ( 3114 nt / 3453 nt ) Click for intergenic sequence Suva_7.413 - Chr7 (712372..715485) - YGR125W (REAL) Click for BLAST results Click for intergenic sequence Click for intergenic sequence 99% of length of longest homolog ( 1719 nt / 1743 nt ) Click for intergenic sequence Click for intergenic sequence Suva_7.410 - Chr7 (709927..711645) - YPR145W (REAL) Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Click for intergenic sequence Suva_7.trna409I - Chr7 (709036..709109) - tRNA Type: Ile(I) | Anti-Codon: AAU Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Skud_7.trna424N - Chr7 (710476..710549) - tRNA Type: Asn(N) | Anti-Codon: GUU 90% of length of longest homolog ( 3111 nt / 3453 nt ) Click for intergenic sequence Skud_7.436 - Chr7 (721556..724666) - YGR125W (REAL) Click for BLAST results Click for intergenic sequence Click for intergenic sequence 99% of length of longest homolog ( 1719 nt / 1743 nt ) Click for intergenic sequence Click for intergenic sequence Skud_7.435 - Chr7 (719202..720920) - YGR124W (REAL) Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Click for intergenic sequence Skud_7.trna434I - Chr7 (718325..718398) - tRNA Type: Ile(I) | Anti-Codon: AAU Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Smik_6.trna210N - Chr6 (348472..348545) - tRNA Type: Asn(N) | Anti-Codon: GUU 90% of length of longest homolog ( 3111 nt / 3453 nt ) Click for intergenic sequence Smik_6.221 - Chr6 (360160..363270) - YGR125W (REAL) Click for BLAST results Click for intergenic sequence Click for intergenic sequence 99% of length of longest homolog ( 1719 nt / 1743 nt ) Click for intergenic sequence Click for intergenic sequence Smik_6.220 - Chr6 (357844..359562) - YGR124W (REAL) Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Click for intergenic sequence Smik_6.trna219I - Chr6 (357020..357093) - tRNA Type: Ile(I) | Anti-Codon: AAU Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Scer_7.trna23N - Chr7 (731137..731210) - Asparagine tRNA (tRNA-Asn), predicted by tRNAscan-SE analysis; tRNA Type: Asn (N) | Anti-Codon: GUU | Cove Score: 77.73 90% of length of longest homolog ( 3111 nt / 3453 nt ) Click for intergenic sequence YGR125W - Chr7 (742325..745435) - Putative protein of unknown function; deletion mutant has decreased rapamycin resistance but normal wormannin resistance; green fluorescent protein (GFP)-fusion protein localizes to the vacuole Click for Info Click for BLAST results Click for intergenic sequence Click for intergenic sequence 99% of length of longest homolog ( 1719 nt / 1743 nt ) Click for intergenic sequence Click for intergenic sequence YGR124W (ASN2) - Chr7 (739944..741662) - Asparagine synthetase, isozyme of Asn1p; catalyzes the synthesis of L-asparagine from L-aspartate in the asparagine biosynthetic pathway Click for Info Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Click for intergenic sequence Scer_7.trna25I - Chr7 (739122..739195) - Isoleucine tRNA (tRNA-Ile), predicted by tRNAscan-SE analysis; tRNA Type: Ile (I) | Anti-Codon: AAU | Cove Score: 71.40 Click for intergenic sequence Anc_3.474 Anc_3.trna21N - tRNA Type: Asn (N) | Anti-Codon: GUU Anc_3.485 Anc_3.484 Anc_3.483 Anc_3.482 Anc_3.trna23I - tRNA Type: Ile (I) | Anti-Codon: AAU 97% of length of longest homolog ( 1728 nt / 1776 nt ) Click for intergenic sequence Click for intergenic sequence ZYRO0B04444g - Chr2 complement(363742..365469) - highly similar to uniprot|Q06506 Saccharomyces cerevisiae YPR137W RRP9 part of small (ribosomal) subunit (SSU) processosome (contains U3 snoRNA) Rrp9p is an ortholog of the human U3-55k protein the human cDNA partially complements a yeast rrp9 null mutant. (Pluk et al. (1998) Mol. Cell. Biol. 18 488-498.) U3 small nucleolar ribonucleoprotein-associated protein involved in pre-ribosomal RNA processing. Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Zrou_2.trna13N - Chr2 complement(363385..363458) - tRNA Type: Asn (N) | Anti-Codon: GUU | Cove Score: 74.61 89% of length of longest homolog ( 3075 nt / 3453 nt ) ZYRO0C07986g - Chr3 complement(609503..612577) - similar to uniprot|P53273 Saccharomyces cerevisiae YGR125W Hypothetical ORF Click for BLAST results 99% of length of longest homolog ( 1719 nt / 1743 nt ) Click for intergenic sequence ZYRO0B04136g - Chr2 complement(345085..346803) - highly similar to uniprot|P49089 Saccharomyces cerevisiae YPR145W ASN1 Asparagine synthetase isozyme of Asn2p catalyzes the synthesis of L-asparagine from L- aspartate in the asparagine biosynthetic pathway Click for BLAST results Click for intergenic sequence Click for intergenic sequence 93% of length of longest homolog ( 1593 nt / 1710 nt ) Click for intergenic sequence Click for intergenic sequence ZYRO0B04180g - Chr2 (347882..349474) - similar to uniprot|Q06512 Saccharomyces cerevisiae YPR144C NOC4 Nucleolar protein forms a complex with Nop14p that mediates maturation and nuclear export of 40S ribosomal subunits Click for BLAST results 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Zrou_2.trna10I - Chr2 complement(349789..349862) - tRNA Type: Ile (I) | Anti-Codon: AAU | Cove Score: 67.10 97% of length of longest homolog ( 1719 nt / 1776 nt ) Click for intergenic sequence Click for intergenic sequence TDEL0F03590 - Chr6 (659038..660756) - Anc_3.474 YPR137W Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence TDEL0Ftrna3N - Chr6 (660889..660962) - tRNA Type: Asn (N) 90% of length of longest homolog ( 3096 nt / 3453 nt ) Click for intergenic sequence TDEL0D05530 - Chr4 (999021..1002116) - Anc_3.485 YGR125W Click for BLAST results Click for intergenic sequence Click for intergenic sequence 99% of length of longest homolog ( 1722 nt / 1743 nt ) Click for intergenic sequence Click for intergenic sequence TDEL0D05520 - Chr4 (996468..998189) - Anc_3.483 YPR145W Click for BLAST results Click for intergenic sequence Click for intergenic sequence 95% of length of longest homolog ( 1623 nt / 1710 nt ) Click for intergenic sequence Click for intergenic sequence TDEL0D05510 - Chr4 complement(993935..995557) - Anc_3.482 YPR144C Click for BLAST results 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence TDEL0Dtrna1I - Chr4 (993742..993815) - tRNA Type: Ile (I) 96% of length of longest homolog ( 1704 nt / 1776 nt ) Click for intergenic sequence Click for intergenic sequence KLLA0B11077g - Chr2 complement(970761..972464) - similar to uniprot|Q06506 Saccharomyces cerevisiae YPR137W RRP9 part of small (ribosomal) subunit (SSU) processosome (contains U3 snoRNA) Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 84% of length of longest homolog ( 819 nt / 972 nt ) Click for intergenic sequence KLLA0B11055g - Chr2 (969484..970302) - some similarities with uniprot|Q12218 Saccharomyces cerevisiae YOR009W YOROO9W TIR4 protein Click for BLAST results 92% of length of longest homolog ( 3183 nt / 3453 nt ) KLLA0E04731g - Chr5 complement(418094..421276) - similar to uniprot|P53273 Saccharomyces cerevisiae YGR125W Hypothetical ORF Click for BLAST results 99% of length of longest homolog ( 1725 nt / 1743 nt ) Click for intergenic sequence KLLA0B10868g - Chr2 complement(951111..952835) - highly similar to uniprot|P49089 Saccharomyces cerevisiae YPR145W ASN1 Asparagine synthetase isozyme of Asn2p catalyzes the synthesis of L-asparagine from L- aspartate in the asparagine biosynthetic pathway Click for BLAST results Click for intergenic sequence Click for intergenic sequence 92% of length of longest homolog ( 1566 nt / 1710 nt ) Click for intergenic sequence KLLA0B10890g - Chr2 (954119..955684) - similar to uniprot|Q06512 Saccharomyces cerevisiae YPR144C NOC4 Nucleolar protein forms a complex with Nop14p that mediates maturation and nuclear export of 40S ribosomal subunits Click for BLAST results 100% of length of longest homolog ( 1776 nt / 1776 nt ) Click for intergenic sequence Click for intergenic sequence AAR102C - Chr1 complement(526057..527832) - Syntenic homolog of Saccharomyces cerevisiae YPR137W (RRP9) Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 85% of length of longest homolog ( 525 nt / 615 nt ) Click for intergenic sequence Click for intergenic sequence AAR101W - Chr1 (525298..525822) - NOHBY112; No homolog in Saccharomyces cerevisiae Click for BLAST results Click for intergenic sequence 100% of length of longest homolog ( 72 nt / 72 nt ) Click for intergenic sequence Agos_1.trna21H - Chr1 (524796..524867) - tRNA Type: His (H) | Anti-Codon: GUG | Cove Score: 66.47 100% of length of longest homolog ( 74 nt / 74 nt ) Agos_1.trna18N - Chr1 complement(491741..491814) - tRNA Type: Asn (N) | Anti-Codon: GUU | Cove Score: 76.93 88% of length of longest homolog ( 3048 nt / 3453 nt ) Click for intergenic sequence AFR304W - Chr6 (991645..994692) - Syntenic homolog of Saccharomyces cerevisiae YGR125W Click for BLAST results Click for intergenic sequence 98% of length of longest homolog ( 306 nt / 312 nt ) Click for intergenic sequence Click for intergenic sequence Agos_YGOB_YPR145C-A - Chr6 complement(990915..991220) - ANNOTATED BY YGOB - Click for BLAST results 98% of length of longest homolog ( 1716 nt / 1743 nt ) Click for intergenic sequence AFR303W - Chr6 (989036..990751) - Syntenic homolog of Saccharomyces cerevisiae YGR124W (ASN2) and YPR145W (ASN1) Click for BLAST results 92% of length of longest homolog ( 1569 nt / 1710 nt ) ADR171C - Chr4 complement(1002941..1004509) - Non-syntenic homolog of Saccharomyces cerevisiae YPR144C Click for BLAST results 96% of length of longest homolog ( 1701 nt / 1776 nt ) Click for intergenic sequence Click for intergenic sequence Ecym_4433 - Chr4 complement(893223..894923) - similar to Ashbya gossypii AAR102C Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 615 nt / 615 nt ) Click for intergenic sequence Ecym_4432 - Chr4 (892077..892691) - similar to Ashbya gossypii AAR101W Click for BLAST results 100% of length of longest homolog ( 74 nt / 74 nt ) Ecym_4.trna7N - Chr4 complement(855440..855513) - tRNA-Asn; Ecym_4412 99% of length of longest homolog ( 1722 nt / 1743 nt ) Click for intergenic sequence Ecym_1244 - Chr1 complement(501719..503440) - similar to Ashbya gossypii AFR303W Click for BLAST results Click for intergenic sequence Click for intergenic sequence 92% of length of longest homolog ( 1572 nt / 1710 nt ) Click for intergenic sequence Click for intergenic sequence Ecym_1245 - Chr1 (504606..506177) - similar to Ashbya gossypii ADR171C Click for BLAST results 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Ecym_1.trna2I - Chr1 (506295..506368) - tRNA-Ile; Ecym_1246 97% of length of longest homolog ( 1728 nt / 1776 nt ) Click for intergenic sequence Click for intergenic sequence SAKL0F03432g - Chr6 complement(274302..276029) - similar to uniprot|Q06506 Saccharomyces cerevisiae YPR137W RRP9 part of small (ribosomal) subunit (SSU) processosome (contains U3 snoRNA) Rrp9p is an ortholog of the human U3-55k protein the human cDNA partially complements a yeast rrp9 null mutant. (Pluk et al. (1998) Mol. Cell. Biol. 18 488-498.) U3 small nucleolar ribonucleoprotein-associated protein involved in pre- ribosomal RNA processing. Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 972 nt / 972 nt ) Click for intergenic sequence Click for intergenic sequence SAKL0F03410g - Chr6 (272918..273889) - no similarity Click for BLAST results 100% of length of longest homolog ( 72 nt / 72 nt ) Click for intergenic sequence Click for intergenic sequence Sklu_6.trna8H - Chr6 (272375..272446) - tRNA Type: His (H) | Anti-Codon: GUG | Cove Score: 65.11 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Sklu_6.trna7N - Chr6 complement(270448..270521) - tRNA Type: Asn (N) | Anti-Codon: GUU | Cove Score: 76.93 91% of length of longest homolog ( 3153 nt / 3453 nt ) SAKL0F02926g - Chr6 complement(245957..249109) - similar to uniprot|P53273 Saccharomyces cerevisiae YGR125W Hypothetical ORF Click for BLAST results 99% of length of longest homolog ( 1722 nt / 1743 nt ) Click for intergenic sequence SAKL0F02970g - Chr6 complement(252336..254057) - highly similar to uniprot|P49089 Saccharomyces cerevisiae YPR145W ASN1 Asparagine synthetase isozyme of Asn2p catalyzes the synthesis of L-asparagine from L- aspartate in the asparagine biosynthetic pathway Click for BLAST results Click for intergenic sequence Click for intergenic sequence 94% of length of longest homolog ( 1602 nt / 1710 nt ) Click for intergenic sequence Click for intergenic sequence SAKL0F03014g - Chr6 (255267..256868) - similar to uniprot|Q06512 Saccharomyces cerevisiae YPR144C NOC4 Nucleolar protein forms a complex with Nop14p that mediates maturation and nuclear export of 40S ribosomal subunits Click for BLAST results 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Sklu_6.trna5I - Chr6 complement(257363..257436) - tRNA Type: Ile (I) | Anti-Codon: AAU | Cove Score: 71.40 96% of length of longest homolog ( 1713 nt / 1776 nt ) Click for intergenic sequence Click for intergenic sequence KLTH0F14344g - Chr6 (1177844..1179556) - highly similar to uniprot|Q06506 Saccharomyces cerevisiae YPR137W RRP9 part of small (ribosomal) subunit (SSU) processosome (contains U3 snoRNA) Rrp9p is an ortholog of the human U3-55k protein the human cDNA partially complements a yeast rrp9 null mutant. (Pluk et al. (1998) Mol. Cell. Biol. 18 488-498.) U3 small nucleolar ribonucleoprotein-associated protein involved in pre-ribosomal RNA processing. Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 72 nt / 72 nt ) Click for intergenic sequence Click for intergenic sequence Kthe_6.trna34H - Chr6 complement(1180380..1180451) - tRNA Type: His (H) | Anti-Codon: GUG | Cove Score: 64.62 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Kthe_6.trna35N - Chr6 (1181595..1181668) - tRNA Type: Asn (N) | Anti-Codon: GUU | Cove Score: 76.93 88% of length of longest homolog ( 3033 nt / 3453 nt ) KLTH0F14674g - Chr6 (1201874..1204906) - similar to uniprot|P53273 Saccharomyces cerevisiae YGR125W Hypothetical ORF Click for BLAST results 99% of length of longest homolog ( 1722 nt / 1743 nt ) Click for intergenic sequence KLTH0F14630g - Chr6 (1198036..1199757) - highly similar to uniprot|P49089 Saccharomyces cerevisiae YPR145W ASN1 Asparagine synthetase isozyme of Asn2p catalyzes the synthesis of L-asparagine from L- aspartate in the asparagine biosynthetic pathway Click for BLAST results Click for intergenic sequence Click for intergenic sequence 94% of length of longest homolog ( 1602 nt / 1710 nt ) Click for intergenic sequence Click for intergenic sequence KLTH0F14586g - Chr6 complement(1195172..1196773) - similar to uniprot|Q06512 Saccharomyces cerevisiae YPR144C NOC4 Nucleolar protein forms a complex with Nop14p that mediates maturation and nuclear export of 40S ribosomal subunits Click for BLAST results 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Kthe_6.trna36I - Chr6 (1194921..1194994) - tRNA Type: Ile (I) | Anti-Codon: AAU | Cove Score: 71.40 96% of length of longest homolog ( 1713 nt / 1776 nt ) Click for intergenic sequence Click for intergenic sequence Kwal_55.21144 - s55 (703153..704865) - YPR137W (RRP9) - U3 small nucleolar ribonucleoprotein-associated protein involved in pre-ribosomal RNA processing. [contig 132] FULL Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Kwal_55.trna21N - s55 (705183..705256) - tRNA Type: Asn (N) | Anti-Codon: GUU | Cove Score: 76.93 88% of length of longest homolog ( 3036 nt / 3453 nt ) Kwal_55.21201 - s55 (727206..730241) - YGR125W - Hypothetical ORF [contig 295] FULL Click for BLAST results 99% of length of longest homolog ( 1722 nt / 1743 nt ) Click for intergenic sequence Kwal_55.21187 - s55 (723404..725125) - YPR145W (ASN1) - asparagine synthetase [contig 295] FULL Click for BLAST results Click for intergenic sequence 100% of length of longest homolog ( 528 nt / 528 nt ) Click for intergenic sequence Click for intergenic sequence Kwal_55.21181 - s55 (721750..722277) - [contig 295] FULL Click for BLAST results 94% of length of longest homolog ( 1602 nt / 1710 nt ) Click for intergenic sequence Click for intergenic sequence Kwal_55.21179 - s55 complement(719541..721142) - YPR144C (UTP19) - U3 protein component [contig 295] FULL Click for BLAST results 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Kwal_55.trna22I - s55 (719313..719386) - tRNA Type: Ile (I) | Anti-Codon: AAU | Cove Score: 71.40 97% of length of longest homolog ( 1722 nt / 1776 nt ) Click for intergenic sequence Click for intergenic sequence YPR137W (RRP9) - Chr16 (802359..804080) - Protein involved in pre-rRNA processing, associated with U3 snRNP; component of small ribosomal subunit (SSU) processosome; ortholog of the human U3-55k protein Click for Info Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Scer_16.trna13N - Chr16 (810676..810749) - Asparagine tRNA (tRNA-Asn), predicted by tRNAscan-SE analysis; tRNA Type: Asn (N) | Anti-Codon: GUU | Cove Score: 77.73 76% of length of longest homolog ( 237 nt / 312 nt ) Click for intergenic sequence YPR145C-A - Chr16 complement(824690..824926) - Putative protein of unknown function [Note: Similarity to YLR34C and YGR035C] Click for Info Click for BLAST results 99% of length of longest homolog ( 1719 nt / 1743 nt ) Click for intergenic sequence Click for intergenic sequence YPR145W (ASN1) - Chr16 (822620..824338) - Asparagine synthetase, isozyme of Asn2p; catalyzes the synthesis of L-asparagine from L-aspartate in the asparagine biosynthetic pathway Click for Info Click for BLAST results 100% of length of longest homolog ( 172 nt / 172 nt ) Click for intergenic sequence Click for intergenic sequence Scer_snR45 - Chr16 (821732..821903) - C/D box small nucleolar RNA (snoRNA) but not shown to be active and no target site is predicted within the ribosomal RNAs Click for intergenic sequence 97% of length of longest homolog ( 1659 nt / 1710 nt ) Click for intergenic sequence Click for intergenic sequence YPR144C (NOC4) - Chr16 complement(819765..821423) - Nucleolar protein, forms a complex with Nop14p that mediates maturation and nuclear export of 40S ribosomal subunits Click for Info Click for BLAST results 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Click for intergenic sequence Scer_16.trna14I - Chr16 (819529..819602) - Isoleucine tRNA (tRNA-Ile), predicted by tRNAscan-SE analysis; tRNA Type: Ile (I) | Anti-Codon: AAU | Cove Score: 71.40 Click for intergenic sequence 97% of length of longest homolog ( 1722 nt / 1776 nt ) Click for intergenic sequence Click for intergenic sequence Smik_16.383 - Chr16 (679641..681362) - YPR137W (REAL) Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Smik_16.trna384N - Chr16 (682172..682245) - tRNA Type: Asn(N) | Anti-Codon: GUU 81% of length of longest homolog ( 252 nt / 312 nt ) Click for intergenic sequence Smik_16.397 - Chr16 complement(696642..696893) - YPR145C-A (REAL) Click for BLAST results 99% of length of longest homolog ( 1719 nt / 1743 nt ) Click for intergenic sequence Click for intergenic sequence Smik_16.396 - Chr16 (694650..696368) - YPR145W (REAL) Click for BLAST results Click for intergenic sequence Click for intergenic sequence 97% of length of longest homolog ( 1659 nt / 1710 nt ) Click for intergenic sequence Click for intergenic sequence Smik_16.395 - Chr16 complement(691780..693438) - YPR144C (REAL) Click for BLAST results 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Click for intergenic sequence Smik_16.trna394I - Chr16 (691568..691641) - tRNA Type: Ile(I) | Anti-Codon: AAU 100% of length of longest homolog ( 69 nt / 69 nt ) Click for intergenic sequence Click for intergenic sequence Smik_16.393 - Chr16 complement(691371..691439) -  YDR366C (REPEAT) Click for BLAST results 97% of length of longest homolog ( 1722 nt / 1776 nt ) Click for intergenic sequence Click for intergenic sequence Skud_16.427 - Chr16 (761681..763402) - YPR137W (REAL) Click for BLAST results 100% of length of longest homolog ( 117 nt / 117 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence Skud_16.428 - Chr16 complement(763980..764033,764037..764099) - YLR334C (REPEAT) Click for BLAST results 100% of length of longest homolog ( 108 nt / 108 nt ) Click for intergenic sequence Click for intergenic sequence Skud_16.429 - Chr16 (764068..764175) -  YOR192C-C (REPEAT) Click for BLAST results 100% of length of longest homolog ( 78 nt / 78 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence Skud_16.430 - Chr16 (764159..764188,764198..764245) -  YHR145C (REPEAT) Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Skud_16.trna431N - Chr16 (764257..764330) - tRNA Type: Asn(N) | Anti-Codon: GUU 74% of length of longest homolog ( 231 nt / 312 nt ) Click for intergenic sequence Skud_16.440 - Chr16 complement(778385..778615) - YPR145C-A (REAL) Click for BLAST results 99% of length of longest homolog ( 1719 nt / 1743 nt ) Click for intergenic sequence Click for intergenic sequence Skud_16.439 - Chr16 (776317..778035) - YPR145W (REAL) Click for BLAST results Click for intergenic sequence Click for intergenic sequence 97% of length of longest homolog ( 1653 nt / 1710 nt ) Click for intergenic sequence Click for intergenic sequence Skud_16.438 - Chr16 complement(773466..775118) - YPR144C (REAL) Click for BLAST results 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Click for intergenic sequence Skud_16.trna437I - Chr16 (773262..773335) - tRNA Type: Ile(I) | Anti-Codon: AAU Click for intergenic sequence 97% of length of longest homolog ( 1722 nt / 1776 nt ) Click for intergenic sequence Click for intergenic sequence Suva_16.464 - Chr16 (804728..806449) - YPR137W (REAL) Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Suva_16.trna465N - Chr16 (806844..806917) - tRNA Type: Asn(N) | Anti-Codon: GUU 75% of length of longest homolog ( 234 nt / 312 nt ) Click for intergenic sequence Suva_16.475 - Chr16 complement(821114..821347) - YPR145C-A (REAL) Click for BLAST results 99% of length of longest homolog ( 1719 nt / 1743 nt ) Click for intergenic sequence Click for intergenic sequence Suva_16.474 - Chr16 (819031..820749) - YGR124W (REAL) Click for BLAST results Click for intergenic sequence Click for intergenic sequence 97% of length of longest homolog ( 1659 nt / 1710 nt ) Click for intergenic sequence Click for intergenic sequence Suva_16.473 - Chr16 complement(816195..817853) - YPR144C (REAL) Click for BLAST results 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Click for intergenic sequence Suva_16.trna472I - Chr16 (815950..816023) - tRNA Type: Ile(I) | Anti-Codon: AAU Click for intergenic sequence 95% of length of longest homolog ( 1692 nt / 1776 nt ) Click for intergenic sequence Click for intergenic sequence CAGL0D04884g - Chr4 (475678..477369) - highly similar to uniprot|Q06506 Saccharomyces cerevisiae YPR137w RRP9 Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Cgla_4.trna10N - Chr4 complement(477723..477796) - tRNA Type: Asn (N) | Anti-Codon: GUU | Cove Score: 76.93 93% of length of longest homolog ( 3213 nt / 3453 nt ) Click for intergenic sequence CAGL0I10626g - Chr9 complement(1048818..1052030) - similar to uniprot|P53273 Saccharomyces cerevisiae YGR125w Click for BLAST results Click for intergenic sequence Click for intergenic sequence 99% of length of longest homolog ( 1725 nt / 1743 nt ) Click for intergenic sequence Click for intergenic sequence CAGL0I10648g - Chr9 complement(1053030..1054754) - highly similar to uniprot|P49090 Saccharomyces cerevisiae YGR124w asparagine synthetase or uniprot|P49089 Saccharomyces cerevisiae YPR145w ASN1 Click for BLAST results Click for intergenic sequence Click for intergenic sequence 98% of length of longest homolog ( 1668 nt / 1710 nt ) Click for intergenic sequence Click for intergenic sequence CAGL0I10670g - Chr9 (1056629..1058296) - similar to uniprot|Q06512 Saccharomyces cerevisiae YPR144c Click for BLAST results 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Cgla_9.trna25I - Chr9 complement(1058429..1058502) - tRNA Type: Ile (I) | Anti-Codon: AAU | Cove Score: 71.40 97% of length of longest homolog ( 1716 nt / 1776 nt ) Click for intergenic sequence KAFR0A05270 - Chr1 complement(1043260..1044975) - Anc_3.474 YPR137W Click for BLAST results 100% of length of longest homolog ( 74 nt / 74 nt ) KAFR0Btrna6N - Chr2 (1362887..1362960) - tRNA Type: Asn (N) 59% of length of longest homolog ( 183 nt / 312 nt ) Click for intergenic sequence KAFR0G03675 - Chr7 complement(759961..760143) Click for BLAST results 99% of length of longest homolog ( 1719 nt / 1743 nt ) Click for intergenic sequence KAFR0G03670 - Chr7 (758115..759833) - Anc_3.483 YPR145W Click for BLAST results 96% of length of longest homolog ( 1647 nt / 1710 nt ) Click for intergenic sequence KAFR0B06630 - Chr2 complement(1382701..1384347) - Anc_3.482 YPR144C Click for BLAST results 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Click for intergenic sequence KAFR0Btrna7I - Chr2 (1382182..1382255) - tRNA Type: Ile (I) Click for intergenic sequence 96% of length of longest homolog ( 1701 nt / 1776 nt ) Click for intergenic sequence KNAG0A07760 - Chr1 complement(1232666..1234366) - Anc_3.474 YPR137W Click for BLAST results 100% of length of longest homolog ( 74 nt / 74 nt ) KNAG0Atrna5N - Chr1 (1250231..1250304) - tRNA Type: Asn (N) 62% of length of longest homolog ( 195 nt / 312 nt ) Click for intergenic sequence KNAG0A07925 - Chr1 complement(1264926..1265120) Click for BLAST results 100% of length of longest homolog ( 1737 nt / 1743 nt ) Click for intergenic sequence Click for intergenic sequence KNAG0A07920 - Chr1 (1262894..1264630) - Anc_3.483 YPR145W Click for BLAST results Click for intergenic sequence Click for intergenic sequence 97% of length of longest homolog ( 1656 nt / 1710 nt ) Click for intergenic sequence KNAG0A07910 - Chr1 complement(1260083..1261738) - Anc_3.482 YPR144C Click for BLAST results 97% of length of longest homolog ( 1716 nt / 1776 nt ) Click for intergenic sequence Click for intergenic sequence NCAS0A11750 - Chr1 (2335605..2337320) - Anc_3.474 YPR137W Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence NCAS0Atrna7N - Chr1 (2337725..2337798) - tRNA Type: Asn (N) 74% of length of longest homolog ( 231 nt / 312 nt ) Click for intergenic sequence NCAS0F03520 - Chr6 complement(705454..705684) Click for BLAST results 99% of length of longest homolog ( 1728 nt / 1743 nt ) Click for intergenic sequence Click for intergenic sequence NCAS0F03510 - Chr6 (703369..705096) - Anc_3.483 YGR124W Click for BLAST results Click for intergenic sequence Click for intergenic sequence 97% of length of longest homolog ( 1665 nt / 1710 nt ) Click for intergenic sequence NCAS0F03500 - Chr6 complement(700666..702330) -  Click for BLAST results 96% of length of longest homolog ( 1707 nt / 1776 nt ) Click for intergenic sequence Click for intergenic sequence NDAI0A04540 - Chr1 complement(1023305..1025011) - Anc_3.474 YPR137W Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence NDAI0Atrna7N - Chr1 complement(1022791..1022864) - tRNA Type: Asn (N) 76% of length of longest homolog ( 237 nt / 312 nt ) Click for intergenic sequence NDAI0B05820 - Chr2 complement(1414176..1414412) Click for BLAST results 99% of length of longest homolog ( 1734 nt / 1743 nt ) Click for intergenic sequence Click for intergenic sequence NDAI0B05810 - Chr2 (1412089..1413822) - Anc_3.483 YGR124W Click for BLAST results Click for intergenic sequence Click for intergenic sequence 97% of length of longest homolog ( 1653 nt / 1710 nt ) Click for intergenic sequence NDAI0B05800 - Chr2 complement(1408822..1410474) - Anc_3.482 YPR144C Click for BLAST results 96% of length of longest homolog ( 1710 nt / 1776 nt ) Click for intergenic sequence TBLA0C05340 - Chr3 complement(1293851..1295560) - Anc_3.474 YPR137W Click for BLAST results 100% of length of longest homolog ( 3453 nt / 3453 nt ) Click for intergenic sequence TBLA0C04440 - Chr3 (1075482..1078934) - Anc_3.485 YGR125W Click for BLAST results Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 1743 nt / 1743 nt ) Click for intergenic sequence Click for intergenic sequence TBLA0C04430 - Chr3 (1072027..1073769) - Anc_3.483 YPR145W Click for BLAST results Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 1710 nt / 1710 nt ) Click for intergenic sequence TBLA0C04420 - Chr3 complement(1067972..1069681) - Anc_3.482 YPR144C Click for BLAST results 97% of length of longest homolog ( 1722 nt / 1776 nt ) Click for intergenic sequence Click for intergenic sequence TPHA0D04170 - Chr4 (894124..895845) - Anc_3.474 YPR137W Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence TPHA0Dtrna4N - Chr4 (896679..896752) - tRNA Type: Asn (N) 98% of length of longest homolog ( 1677 nt / 1710 nt ) Click for intergenic sequence TPHA0D03230 - Chr4 complement(666034..667710) - Anc_3.482 YPR144C Click for BLAST results 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Click for intergenic sequence TPHA0Dtrna7I - Chr4 (665817..665890) - tRNA Type: Ile (I) Click for intergenic sequence 97% of length of longest homolog ( 1725 nt / 1776 nt ) Click for intergenic sequence Click for intergenic sequence Kpol_1050.100 - s1050 (228171..229895) - (228171..229895) [1725 nt, 575 aa] Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Kpol_1050.trna4N - s1050 (232092..232165) - tRNA Type: Asn (N) | Anti-Codon: GUU | Cove Score: 77.01 92% of length of longest homolog ( 3174 nt / 3453 nt ) Click for intergenic sequence Kpol_480.18 - s480 complement(36794..39967) - complement(36794..39967) [3174 nt, 1058 aa] Click for BLAST results Click for intergenic sequence 57% of length of longest homolog ( 177 nt / 312 nt ) Click for intergenic sequence Click for intergenic sequence Kpol_YGOB_YPR145C-A - s480 (41653..41829) - ANNOTATED BY YGOB - Click for BLAST results 99% of length of longest homolog ( 1725 nt / 1743 nt ) Click for intergenic sequence Kpol_480.19 - s480 complement(42251..43975) - complement(42251..43975) [1725 nt, 575 aa] Click for BLAST results 97% of length of longest homolog ( 1665 nt / 1710 nt ) Click for intergenic sequence Kpol_1017.12 - s1017 (35953..37617) - (35953..37617) [1665 nt, 555 aa] Click for BLAST results 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Kpol_1017.trna1I - s1017 complement(37759..37832) - tRNA Type: Ile (I) | Anti-Codon: AAU | Cove Score: 75.24 YGOB Tabulated Text Format