Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA nucleotide sequences for this column Click for multiple sequence alignment for this column Click for FASTA nucleotide sequences for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for yn00 results for all pairs of sequences in this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Email Kevin Byrne Wolfe Laboratory Website Click for information on the species in YGOB Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 96% of length of longest homolog ( 1476 nt / 1542 nt ) Click for intergenic sequence Kpol_1068.2 - s1068 (2343..3818) - (2343..3818) [1476 nt, 492 aa] Click for BLAST results 89% of length of longest homolog ( 891 nt / 1002 nt ) Click for intergenic sequence Kpol_1062.9 - s1062 (27219..28109) - (27219..28109) [891 nt, 297 aa] Click for BLAST results Click for intergenic sequence Click for intergenic sequence 75% of length of longest homolog ( 273 nt / 366 nt ) Click for intergenic sequence Click for intergenic sequence Kpol_1062.10 - s1062 (28590..28862) - (28590..28862) [273 nt, 91 aa] Click for BLAST results 100% of length of longest homolog ( 780 nt / 780 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence Kpol_1062.11 - s1062 complement(29111..29587,30454..30756) - complement(29111..29587,30454..30756) [780 nt, 260 aa] Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 96% of length of longest homolog ( 1482 nt / 1542 nt ) Click for intergenic sequence TPHA0I00300 - Chr9 complement(57211..58692) - Anc_8.848 YMR283C Click for BLAST results 95% of length of longest homolog ( 267 nt / 282 nt ) TPHA0I00330 - Chr9 (63570..63836) - Anc_8.851 YMR286W Click for BLAST results 99% of length of longest homolog ( 333 nt / 336 nt ) Click for intergenic sequence TPHA0J02720 - Chr10 (602224..602556) - Anc_5.462 YDR382W Click for BLAST results Click for intergenic sequence 100% of length of longest homolog ( 1050 nt / 1050 nt ) Click for intergenic sequence Click for intergenic sequence TPHA0J02710 - Chr10 (600526..601575) - Anc_5.460 Click for BLAST results Click for intergenic sequence Click for intergenic sequence 68% of length of longest homolog ( 534 nt / 780 nt ) Click for intergenic sequence TPHA0J02700 - Chr10 (599634..600167) - Anc_5.458 YDR381W Click for BLAST results Click for intergenic sequence 91% of length of longest homolog ( 78 nt / 86 nt ) contains intron(s) Click for intergenic sequence TBLA0Btrna8Y - Chr2 (665948..665987,666002..666039) - tRNA Type: Tyr (Y) 91% of length of longest homolog ( 258 nt / 282 nt ) TBLA0B02910 - Chr2 (670926..671183) - Anc_8.851 YMR286W Click for BLAST results 77% of length of longest homolog ( 597 nt / 780 nt ) Click for intergenic sequence TBLA0A06405 - Chr1 complement(1570427..1571023) Click for BLAST results Click for intergenic sequence Click for intergenic sequence 90% of length of longest homolog ( 77 nt / 86 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence NDAI0Ktrna1Y - Chr11 (75781..75820,75832..75868) - tRNA Type: Tyr (Y) 100% of length of longest homolog ( 72 nt / 72 nt ) Click for intergenic sequence Click for intergenic sequence NDAI0Ktrna1Q - Chr11 (75470..75541) - tRNA Type: Gln (Q) 100% of length of longest homolog ( 963 nt / 963 nt ) Click for intergenic sequence Click for intergenic sequence NDAI0K00356 - Chr11 complement(74013..74975) Click for BLAST results 100% of length of longest homolog ( 3750 nt / 3750 nt ) Click for intergenic sequence Click for intergenic sequence NDAI0K00353 - Chr11 complement(70340..74089) Click for BLAST results Click for intergenic sequence Click for intergenic sequence 98% of length of longest homolog ( 1515 nt / 1542 nt ) Click for intergenic sequence NDAI0K00350 - Chr11 complement(66993..68507) - Anc_8.848 YMR283C Click for BLAST results 87% of length of longest homolog ( 873 nt / 1002 nt ) Click for intergenic sequence NDAI0A04420 - Chr1 (1002320..1003192) Click for BLAST results Click for intergenic sequence Click for intergenic sequence 96% of length of longest homolog ( 351 nt / 366 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence NDAI0A04430 - Chr1 (1003571..1003599,1003699..1004020) - Anc_5.459 YDR381C-A Click for BLAST results 85% of length of longest homolog ( 666 nt / 780 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence NDAI0A04440 - Chr1 complement(1004467..1004847,1005660..1005944) - Anc_5.458 YDR381W Click for BLAST results Click for intergenic sequence Click for intergenic sequence 90% of length of longest homolog ( 77 nt / 86 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence NCAS0Ctrna1Y - Chr3 complement(46135..46171,46183..46222) - tRNA Type: Tyr (Y) Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 615 nt / 615 nt ) Click for intergenic sequence Click for intergenic sequence NCAS0C00330 - Chr3 (48129..48743) Click for BLAST results 100% of length of longest homolog ( 615 nt / 615 nt ) Click for intergenic sequence Click for intergenic sequence NCAS0C00340 - Chr3 complement(48760..49374) -  Click for BLAST results 95% of length of longest homolog ( 1461 nt / 1542 nt ) Click for intergenic sequence NCAS0C00350 - Chr3 (51842..53302) - Anc_8.848 YMR283C Click for BLAST results 100% of length of longest homolog ( 336 nt / 336 nt ) Click for intergenic sequence NCAS0A11870 - Chr1 (2353408..2353743) - Anc_5.462 Click for BLAST results 88% of length of longest homolog ( 879 nt / 1002 nt ) Click for intergenic sequence Click for intergenic sequence NCAS0A11860 - Chr1 complement(2351868..2352746) - Anc_5.461 Click for BLAST results Click for intergenic sequence Click for intergenic sequence 97% of length of longest homolog ( 354 nt / 366 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence NCAS0A11850 - Chr1 complement(2350919..2351243,2351317..2351345) - Anc_5.459 YDR381C-A Click for BLAST results 88% of length of longest homolog ( 690 nt / 780 nt ) contains intron(s) Click for intergenic sequence NCAS0A11840 - Chr1 (2349268..2349549,2350293..2350700) - Anc_5.458 YDR381W Click for BLAST results 97% of length of longest homolog ( 1500 nt / 1542 nt ) KNAG0J00220 - Chr10 (29017..30516) - Anc_8.848 YMR283C Click for BLAST results 99% of length of longest homolog ( 333 nt / 336 nt ) Click for intergenic sequence KNAG0C04710 - Chr3 complement(923355..923687) - Anc_5.462 YDR382W Click for BLAST results 87% of length of longest homolog ( 870 nt / 1002 nt ) Click for intergenic sequence Click for intergenic sequence KNAG0C04720 - Chr3 (924406..925275) -  Click for BLAST results Click for intergenic sequence Click for intergenic sequence 92% of length of longest homolog ( 336 nt / 366 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence KNAG0C04730 - Chr3 (925482..925513,925590..925893) - Anc_5.459 YDR381C-A Click for BLAST results 90% of length of longest homolog ( 702 nt / 780 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence KNAG0C04740 - Chr3 complement(926108..926533,927469..927744) - Anc_5.458 YDR381W Click for BLAST results 100% of length of longest homolog ( 648 nt / 648 nt ) Click for intergenic sequence Click for intergenic sequence KNAG0C04750 - Chr3 complement(928146..928793) -  Click for BLAST results Click for intergenic sequence 90% of length of longest homolog ( 77 nt / 86 nt ) contains intron(s) Click for intergenic sequence KAFR0Atrna1Y - Chr1 (596654..596693,596709..596745) - tRNA Type: Tyr (Y) 91% of length of longest homolog ( 258 nt / 282 nt ) KAFR0A02870 - Chr1 (598363..598620) - Anc_8.851 YMR286W Click for BLAST results 98% of length of longest homolog ( 330 nt / 336 nt ) Click for intergenic sequence KAFR0E03700 - Chr5 complement(742613..742942) - Anc_5.462 YDR382W Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 90% of length of longest homolog ( 330 nt / 366 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence KAFR0E03710 - Chr5 (744336..744370,744440..744734) - Anc_5.459 YDR381C-A Click for BLAST results 91% of length of longest homolog ( 711 nt / 780 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence KAFR0E03720 - Chr5 complement(744915..745358,746003..746269) - Anc_5.458 YDR381W Click for BLAST results Click for intergenic sequence Click for intergenic sequence 87% of length of longest homolog ( 75 nt / 86 nt ) contains intron(s) Click for intergenic sequence Cgla_9.trna5Y - Chr9 (236933..236971,236985..237020) - tRNA Type: Tyr (Y) | Anti-Codon: GUA | Cove Score: 71.62 96% of length of longest homolog ( 270 nt / 282 nt ) CAGL0I02706g - Chr9 (241613..241882) - highly similar to uniprot|P20084 Saccharomyces cerevisiae YMR286w MRPL33 Click for BLAST results 98% of length of longest homolog ( 330 nt / 336 nt ) Click for intergenic sequence CAGL0A03168g - Chr1 (324013..324342) - highly similar to uniprot|P02400 Saccharomyces cerevisiae YDR382w RPLA4 Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 95% of length of longest homolog ( 348 nt / 366 nt ) Click for intergenic sequence Click for intergenic sequence CAGL0A03146g - Chr1 complement(323030..323377) - no similarity Click for BLAST results 90% of length of longest homolog ( 699 nt / 780 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence CAGL0A03117g - Chr1 (320671..320955,322253..322666) - highly similar to uniprot|Q12159 Saccharomyces cerevisiae YDR381w YRA1 Click for BLAST results Click for intergenic sequence Click for intergenic sequence 90% of length of longest homolog ( 77 nt / 86 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence Suva_13.trna473Y - Chr13 (819828..819867,819880..819916) - tRNA Type: Tyr(Y) | Anti-Codon: GUA Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 99% of length of longest homolog ( 1533 nt / 1542 nt ) Click for intergenic sequence Suva_13.472 - Chr13 complement(818023..819555) - YMR283C (REAL) Click for BLAST results 88% of length of longest homolog ( 249 nt / 282 nt ) Suva_13.476 - Chr13 (823880..824128) - YMR286W (REAL) Click for BLAST results 100% of length of longest homolog ( 336 nt / 336 nt ) Click for intergenic sequence Suva_2.557 - Chr2 (990443..990778) - YDR382W (REAL) Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 86% of length of longest homolog ( 315 nt / 366 nt ) Click for intergenic sequence Click for intergenic sequence Suva_2.556 - Chr2 complement(989190..989504) - YDR381C-A (REAL) Click for BLAST results 89% of length of longest homolog ( 696 nt / 780 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence Suva_2.555 - Chr2 (987331..987630,988454..988849) - YDR381W (REAL) Click for BLAST results Click for intergenic sequence Click for intergenic sequence 90% of length of longest homolog ( 77 nt / 86 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence Skud_13.trna456Y - Chr13 (811474..811513,811526..811562) - tRNA Type: Tyr(Y) | Anti-Codon: GUA Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 96% of length of longest homolog ( 1485 nt / 1542 nt ) Click for intergenic sequence Skud_13.455 - Chr13 complement(808556..810040) - YMR283C (REAL) Click for BLAST results 88% of length of longest homolog ( 249 nt / 282 nt ) Skud_13.459 - Chr13 (815502..815750) - YMR286W (REAL) Click for BLAST results 100% of length of longest homolog ( 336 nt / 336 nt ) Click for intergenic sequence Skud_4.654 - Chr4 (1162411..1162746) - YDR382W (REAL) Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 85% of length of longest homolog ( 312 nt / 366 nt ) Click for intergenic sequence Click for intergenic sequence Skud_4.653 - Chr4 complement(1161206..1161517) - YDR381C-A (REAL) Click for BLAST results 87% of length of longest homolog ( 681 nt / 780 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence Skud_4.652 - Chr4 (1159427..1159711,1160524..1160919) - YDR381W (REAL) Click for BLAST results Click for intergenic sequence Click for intergenic sequence 90% of length of longest homolog ( 77 nt / 86 nt ) contains intron(s) Click for intergenic sequence Smik_13.trna499Y - Chr13 (820469..820508,820521..820557) - tRNA Type: Tyr(Y) | Anti-Codon: GUA 96% of length of longest homolog ( 1485 nt / 1542 nt ) Smik_13.496 - Chr13 complement(818336..819820) - YMR283C (REAL) Click for BLAST results 89% of length of longest homolog ( 252 nt / 282 nt ) Smik_13.502 - Chr13 (824481..824732) - YMR286W (REAL) Click for BLAST results 99% of length of longest homolog ( 333 nt / 336 nt ) Click for intergenic sequence Smik_4.652 - Chr4 (1159969..1160301) - YDR382W (REAL) Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 86% of length of longest homolog ( 315 nt / 366 nt ) Click for intergenic sequence Click for intergenic sequence Smik_4.651 - Chr4 complement(1158761..1159075) - YDR381C-A (REAL) Click for BLAST results 87% of length of longest homolog ( 681 nt / 780 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence Smik_4.650 - Chr4 (1157020..1157304,1158069..1158464) - YDR381W (REAL) Click for BLAST results Click for intergenic sequence Click for intergenic sequence 87% of length of longest homolog ( 75 nt / 86 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence Scer_13.trna21Y - Chr13 (837928..837966,837981..838016) - Tyrosine tRNA (tRNA-Tyr), predicted by tRNAscan-SE analysis; can mutate to suppress ochre nonsense mutations; tRNA Type: Tyr (Y) | Anti-Codon: GUA | Cove Score: 68.18 Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 1542 nt / 1542 nt ) Click for intergenic sequence YMR283C (RIT1) - Chr13 complement(835326..836867) - 2'-O-ribosyl phosphate transferase, modifies the initiator methionine tRNA at position 64 to distinguish it from elongator methionine tRNA Click for Info Click for BLAST results 93% of length of longest homolog ( 261 nt / 282 nt ) YMR286W (MRPL33) - Chr13 (841942..842202) - Mitochondrial ribosomal protein of the large subunit Click for Info Click for BLAST results 99% of length of longest homolog ( 333 nt / 336 nt ) Click for intergenic sequence YDR382W (RPP2B) - Chr4 (1239492..1239824) - Ribosomal protein P2 beta, a component of the ribosomal stalk, which is involved in the interaction between translational elongation factors and the ribosome; regulates the accumulation of P1 (Rpp1Ap and Rpp1Bp) in the cytoplasm Click for Info Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 94% of length of longest homolog ( 345 nt / 366 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence YDR381C-A - Chr4 complement(1238312..1238630,1238825..1238850) - Protein of unknown function, localized to the mitochondrial outer membrane Click for Info Click for BLAST results 87% of length of longest homolog ( 681 nt / 780 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence YDR381W (YRA1) - Chr4 (1236558..1236842,1237609..1238004) - RNA binding protein required for export of poly(A)+ mRNA from the nucleus; proposed to couple mRNA export with 3' end processing via its interactions with Mex67p and Pcf11p; functionally redundant with Yra2p, another REF family member Click for Info Click for BLAST results Click for intergenic sequence Anc_8.trna31Y - tRNA Type: Tyr (Y) | Anti-Codon: GUA Anc_8.848 Anc_8.851 Anc_5.462 Anc_5.461 Anc_5.460 Anc_5.459 Anc_5.458 Click for intergenic sequence 87% of length of longest homolog ( 75 nt / 86 nt ) contains intron(s) Click for intergenic sequence Zrou_3.trna40Y - Chr3 (1153528..1153566,1153578..1153613) - tRNA Type: Tyr (Y) | Anti-Codon: GUA | Cove Score: 70.50 92% of length of longest homolog ( 1419 nt / 1542 nt ) ZYRO0G14344g - Chr7 complement(1148368..1149786) - similar to uniprot|P23796 Saccharomyces cerevisiae YMR283C RIT1 Modifies initiator methionine tRNA to distinguish it from elongator methionine tRNA Initiator methionine tRNA 2'-O-ribosyl phosphate transferase Click for BLAST results 90% of length of longest homolog ( 255 nt / 282 nt ) ZYRO0C14894g - Chr3 (1157672..1157926) - highly similar to uniprot|P20084 Saccharomyces cerevisiae YMR286W Click for BLAST results 97% of length of longest homolog ( 327 nt / 336 nt ) Click for intergenic sequence ZYRO0B02398g - Chr2 (195478..195804) - highly similar to uniprot|P02400 Saccharomyces cerevisiae YDR382W RPP2B Ribosomal protein P2 beta a component of the ribosomal stalk which is involved in the interaction between translational elongation factors and the ribosome regulates the accumulation of P1 (Rpp1Ap and Rpp1Bp) in the cytoplasm Click for BLAST results 88% of length of longest homolog ( 885 nt / 1002 nt ) Click for intergenic sequence Click for intergenic sequence ZYRO0B02376g - Chr2 complement(194075..194959) - similar to uniprot|Q12375 Saccharomyces cerevisiae YOR130C ORT1 Ornithine transporter of the mitochondrial inner membrane exports ornithine from mitochondria as part of arginine biosynthesis human ortholog is associated with hyperammonaemia-hyperornithinaemia-homocitrullinuria (HHH) syndrome Click for BLAST results 89% of length of longest homolog ( 936 nt / 1050 nt ) Click for intergenic sequence Click for intergenic sequence ZYRO0B02354g - Chr2 (193051..193986) - similar to uniprot|Q754C3 Ashbya gossypii AFR147C AFR147Cp Click for BLAST results Click for intergenic sequence 84% of length of longest homolog ( 309 nt / 366 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence ZYRO0B02332g - Chr2 complement(192308..192590,192659..192684) - similar to Saccharomyces uniprot|Q3E6R5 cerevisiae YDR381C-A Hypothetical ORF Click for BLAST results 87% of length of longest homolog ( 678 nt / 780 nt ) contains intron(s) Click for intergenic sequence ZYRO0B02310g - Chr2 (190903..191163,191646..192062) - highly similar to uniprot|Q12159 Saccharomyces cerevisiae YDR381W YRA1 Nuclear protein that binds to RNA and to Mex67p Click for BLAST results Click for intergenic sequence 90% of length of longest homolog ( 77 nt / 86 nt ) contains intron(s) Click for intergenic sequence TDEL0Btrna6Y - Chr2 (35039..35078,35087..35123) - tRNA Type: Tyr (Y) 95% of length of longest homolog ( 1470 nt / 1542 nt ) TDEL0A07970 - Chr1 (1391841..1393310) - Anc_8.848 YMR283C Click for BLAST results 93% of length of longest homolog ( 261 nt / 282 nt ) TDEL0B00200 - Chr2 (38779..39039) - Anc_8.851 YMR286W Click for BLAST results 99% of length of longest homolog ( 333 nt / 336 nt ) Click for intergenic sequence TDEL0A03260 - Chr1 (580648..580980) - Anc_5.462 YDR382W Click for BLAST results 89% of length of longest homolog ( 894 nt / 1002 nt ) Click for intergenic sequence Click for intergenic sequence TDEL0A03250 - Chr1 complement(579158..580051) - Anc_5.461 YOR130C Click for BLAST results 94% of length of longest homolog ( 984 nt / 1050 nt ) Click for intergenic sequence Click for intergenic sequence TDEL0A03240 - Chr1 (578122..579105) - Anc_5.460 Click for BLAST results Click for intergenic sequence 91% of length of longest homolog ( 333 nt / 366 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence TDEL0A03230 - Chr1 complement(577599..577902,577962..577990) - Anc_5.459 YDR381C-A Click for BLAST results 84% of length of longest homolog ( 654 nt / 780 nt ) contains intron(s) Click for intergenic sequence TDEL0A03220 - Chr1 (576288..576542,577078..577476) - Anc_5.458 YDR381W Click for BLAST results 95% of length of longest homolog ( 1470 nt / 1542 nt ) KLLA0D01386g - Chr4 (118965..120434) - similar to uniprot|P23796 Saccharomyces cerevisiae YMR283C RIT1 Modifies initiator methionine tRNA to distinguish it from elongator methionine tRNA Initiator methionine tRNA 2'-O-ribosyl phosphate transferase Click for BLAST results 90% of length of longest homolog ( 255 nt / 282 nt ) KLLA0C06270g - Chr3 (554658..554912) - highly similar to uniprot|P20084 Saccharomyces cerevisiae YMR286W MRPL33 Mitochondrial ribosomal protein of the large subunit Click for BLAST results 98% of length of longest homolog ( 330 nt / 336 nt ) Click for intergenic sequence KLLA0E02861g - Chr5 (263645..263974) - similar to uniprot|P02400 Saccharomyces cerevisiae YDR382W RPP2B Ribosomal protein P2 beta a component of the ribosomal stalk which is involved in the interaction between translational elongation factors and the ribosome regulates the accumulation of P1 (Rpp1Ap and Rpp1Bp) in the cytoplasm Click for BLAST results 85% of length of longest homolog ( 855 nt / 1002 nt ) Click for intergenic sequence Click for intergenic sequence KLLA0E02839g - Chr5 complement(261895..262749) - similar to uniprot|Q12375 Saccharomyces cerevisiae YOR130C ORT1 Ornithine transporter of the mitochondrial inner membrane exports ornithine from mitochondria as part of arginine biosynthesis human ortholog is associated with hyperammonaemia-hyperornithinaemia-homocitrullinuria (HHH) syndrome Click for BLAST results 87% of length of longest homolog ( 915 nt / 1050 nt ) Click for intergenic sequence Click for intergenic sequence KLLA0E02817g - Chr5 (260854..261768) - weakly similar to uniprot|P39953 Saccharomyces cerevisiae YEL006W Hypothetical ORF9 Click for BLAST results 100% of length of longest homolog ( 168 nt / 168 nt ) Click for intergenic sequence Click for intergenic sequence KLLA0E02795g - Chr5 (260349..260516) - no similarity Click for BLAST results 89% of length of longest homolog ( 324 nt / 366 nt ) Click for intergenic sequence Click for intergenic sequence KLLA0E02773g - Chr5 complement(259296..259619) - similar to uniprot|Q3E6R5 Saccharomyces cerevisiae YDR381C-A Hypothetical ORF identified by homology Click for BLAST results 86% of length of longest homolog ( 669 nt / 780 nt ) contains intron(s) Click for intergenic sequence KLLA0E02751g - Chr5 (256959..257213,258450..258863) - similar to uniprot|Q12159 Saccharomyces cerevisiae YDR381W YRA1 Nuclear protein that binds to RNA and to Mex67p required for export of poly(A) mRNA from the nucleus member of the REF (RNA and export factor binding proteins) family another family member Yra2p can substitute for Yra1p function Click for BLAST results 95% of length of longest homolog ( 1635 nt / 1725 nt ) contains intron(s) Click for intergenic sequence ABL116C - Chr2 complement(181138..181889,181944..182826) - Syntenic homolog of Saccharomyces cerevisiae YDL210W (UGA4); 1-intron Click for BLAST results 80% of length of longest homolog ( 1227 nt / 1542 nt ) Click for intergenic sequence AFR451C - Chr6 complement(1248648..1249874) - Syntenic homolog of Saccharomyces cerevisiae YMR283C (RIT1) Click for BLAST results 90% of length of longest homolog ( 255 nt / 282 nt ) Click for intergenic sequence AFR450C - Chr6 complement(1248240..1248494) - Syntenic homolog of Saccharomyces cerevisiae YMR286W (MRPL33) Click for BLAST results 97% of length of longest homolog ( 327 nt / 336 nt ) Click for intergenic sequence AFR145C - Chr6 complement(701783..702109) - Syntenic homolog of Saccharomyces cerevisiae YDR382W (RPP2B) Click for BLAST results 84% of length of longest homolog ( 846 nt / 1002 nt ) Click for intergenic sequence Click for intergenic sequence AFR146W - Chr6 (702401..703246) - Syntenic homolog of Saccharomyces cerevisiae YOR130C (ORT1) Click for BLAST results 90% of length of longest homolog ( 948 nt / 1050 nt ) Click for intergenic sequence Click for intergenic sequence AFR147C - Chr6 complement(703267..704214) - NOHBY626; No homolog in Saccharomyces cerevisiae Click for BLAST results Click for intergenic sequence 76% of length of longest homolog ( 279 nt / 366 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence AFR148W - Chr6 (704677..704683,704748..705019) - Syntenic homolog of Saccharomyces cerevisiae YDR381C-A; 1-intron Click for BLAST results 85% of length of longest homolog ( 663 nt / 780 nt ) contains intron(s) Click for intergenic sequence AFR149C - Chr6 complement(705108..705521,706052..706300) - Syntenic homolog of Saccharomyces cerevisiae YDR381W (YRA1); 1-intron Click for BLAST results 100% of length of longest homolog ( 1719 nt / 1725 nt ) Click for intergenic sequence Click for intergenic sequence Ecym_4621 - Chr4 complement(1216034..1217752) - similar to Ashbya gossypii ABL116C Click for BLAST results 87% of length of longest homolog ( 75 nt / 86 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence Ecym_4.trna21Y - Chr4 complement(1218198..1218233,1218249..1218287) - tRNA-Tyr; Ecym_4622 Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 94% of length of longest homolog ( 1443 nt / 1542 nt ) Click for intergenic sequence Click for intergenic sequence Ecym_4623 - Chr4 (1219438..1220880) - similar to Ashbya gossypii AFR451C Click for BLAST results 90% of length of longest homolog ( 255 nt / 282 nt ) Click for intergenic sequence Click for intergenic sequence Ecym_4624 - Chr4 (1221125..1221379) - similar to Ashbya gossypii AFR450C Click for BLAST results 100% of length of longest homolog ( 75 nt / 75 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence Ecym_4.trna22Y - Chr4 complement(1226307..1226342,1226358..1226396) - tRNA-Tyr; Ecym_4627 97% of length of longest homolog ( 327 nt / 336 nt ) Click for intergenic sequence Click for intergenic sequence Ecym_4628 - Chr4 complement(1226684..1227010) - similar to Ashbya gossypii AFR145C Click for BLAST results 85% of length of longest homolog ( 852 nt / 1002 nt ) Click for intergenic sequence Click for intergenic sequence Ecym_4629 - Chr4 (1227427..1228278) - similar to Ashbya gossypii AFR146W Click for BLAST results 86% of length of longest homolog ( 900 nt / 1050 nt ) Click for intergenic sequence Click for intergenic sequence Ecym_4630 - Chr4 complement(1228327..1229226) - similar to Ashbya gossypii AFR147C Click for BLAST results Click for intergenic sequence 95% of length of longest homolog ( 348 nt / 366 nt ) contains intron(s) Click for intergenic sequence Ecym_4631 - Chr4 (1229875..1229903,1229985..1230303) - similar to Ashbya gossypii AFR148W 1-intron Click for BLAST results 100% of length of longest homolog ( 1725 nt / 1725 nt ) Click for intergenic sequence SAKL0D01232g - Chr4 complement(90918..92642) - similar to uniprot|P32837 Saccharomyces cerevisiae YDL210W UGA4 Permease that serves as a gamma-aminobutyrate (GABA) transport protein involved in the utilization of GABA as a nitrogen source catalyzes the transport of putrescine and delta-aminolevulinic acid (ALA) localized to the vacuolar membrane Click for BLAST results 98% of length of longest homolog ( 1509 nt / 1542 nt ) SAKL0D01276g - Chr4 (96411..97919) - similar to uniprot|P23796 Saccharomyces cerevisiae YMR283C RIT1 Modifies initiator methionine tRNA to distinguish it from elongator methionine tRNA Initiator methionine tRNA 2'-O-ribosyl phosphate transferase Click for BLAST results 90% of length of longest homolog ( 255 nt / 282 nt ) SAKL0D01144g - Chr4 complement(85723..85977) - highly similar to uniprot|P20084 Saccharomyces cerevisiae YMR286W MRPL33 Mitochondrial ribosomal protein of the large subunit Click for BLAST results 98% of length of longest homolog ( 330 nt / 336 nt ) Click for intergenic sequence SAKL0G03168g - Chr7 (261471..261800) - highly similar to uniprot|P02400 Saccharomyces cerevisiae YDR382W RPP2B Ribosomal protein P2 beta a component of the ribosomal stalk which is involved in the interaction between translational elongation factors and the ribosome regulates the accumulation of P1 (Rpp1Ap and Rpp1Bp) in the cytoplasm Click for BLAST results 84% of length of longest homolog ( 837 nt / 1002 nt ) Click for intergenic sequence Click for intergenic sequence SAKL0G03146g - Chr7 complement(260142..260978) - similar to uniprot|Q12375 Saccharomyces cerevisiae YOR130C ORT1 Ornithine transporter of the mitochondrial inner membrane exports ornithine from mitochondria as part of arginine biosynthesis human ortholog is associated with hyperammonaemia-hyperornithinaemia-homocitrullinuria (HHH) syndrome Click for BLAST results 93% of length of longest homolog ( 972 nt / 1050 nt ) Click for intergenic sequence Click for intergenic sequence SAKL0G03124g - Chr7 (259110..260081) - weakly similar to uniprot|P39953 Saccharomyces cerevisiae YEL006W Hypothetical ORF Click for BLAST results Click for intergenic sequence 88% of length of longest homolog ( 321 nt / 366 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence SAKL0G03102g - Chr7 complement(257619..257910,258065..258093) - similar to uniprot|Q3E6R5 Saccharomyces cerevisiae YDR381C-A Hypothetical ORF identified by homology Click for BLAST results 82% of length of longest homolog ( 642 nt / 780 nt ) contains intron(s) Click for intergenic sequence SAKL0G03080g - Chr7 (255941..256189,256954..257346) - similar to uniprot|Q12159 Saccharomyces cerevisiae YDR381W YRA1 Nuclear protein that binds to RNA and to Mex67p required for export of poly(A) mRNA from the nucleus member of the REF (RNA and export factor binding proteins) family another family member Yra2p can substitute for Yra1p function Click for BLAST results 92% of length of longest homolog ( 1425 nt / 1542 nt ) KLTH0C03696g - Chr3 (320129..321553) - similar to uniprot|P23796 Saccharomyces cerevisiae YMR283C RIT1 Modifies initiator methionine tRNA to distinguish it from elongator methionine tRNA Initiator methionine tRNA 2'-O-ribosyl phosphate transferase Click for BLAST results 90% of length of longest homolog ( 255 nt / 282 nt ) KLTH0C03630g - Chr3 (315520..315774) - similar to uniprot|P20084 Saccharomyces cerevisiae YMR286W MRPL33 Mitochondrial ribosomal protein of the large subunit Click for BLAST results 99% of length of longest homolog ( 333 nt / 336 nt ) Click for intergenic sequence KLTH0F15378g - Chr6 complement(1256318..1256650) - similar to uniprot|P02400 Saccharomyces cerevisiae YDR382W RPP2B Ribosomal protein P2 beta a component of the ribosomal stalk which is involved in the interaction between translational elongation factors and the ribosome regulates the accumulation of P1 (Rpp1Ap and Rpp1Bp) in the cytoplasm Click for BLAST results 84% of length of longest homolog ( 837 nt / 1002 nt ) Click for intergenic sequence Click for intergenic sequence KLTH0F15400g - Chr6 (1257203..1258039) - similar to uniprot|Q12375 Saccharomyces cerevisiae YOR130C ORT1 Ornithine transporter of the mitochondrial inner membrane exports ornithine from mitochondria as part of arginine biosynthesis human ortholog is associated with hyperammonaemia- hyperornithinaemia-homocitrullinuria (HHH) syndrome Click for BLAST results 98% of length of longest homolog ( 1026 nt / 1050 nt ) Click for intergenic sequence Click for intergenic sequence KLTH0F15422g - Chr6 complement(1258131..1259156) - weakly similar to uniprot|P39953 Saccharomyces cerevisiae YEL006W Hypothetical ORF Click for BLAST results Click for intergenic sequence 86% of length of longest homolog ( 315 nt / 366 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence KLTH0F15444g - Chr6 (1259731..1259762,1259839..1260121) - similar to uniprot|Q3E6R5 Saccharomyces cerevisiae YDR381C-A Hypothetical ORF identified by homology. See FEBS Letters [2000]487:31-36. Click for BLAST results 82% of length of longest homolog ( 642 nt / 780 nt ) contains intron(s) Click for intergenic sequence KLTH0F15466g - Chr6 complement(1260382..1260771,1261466..1261717) - similar to uniprot|Q12159 Saccharomyces cerevisiae YDR381W YRA1 Nuclear protein that binds to RNA and to Mex67p required for export of poly(A) mRNA from the nucleus member of the REF (RNA and export factor binding proteins) family another family member Yra2p can substitute for Yra1p function Click for BLAST results 97% of length of longest homolog ( 1503 nt / 1542 nt ) Kwal_27.10219 - s27 (246213..247715) - YMR283C (RIT1) - Initiator methionine tRNA 2'-O-ribosyl phosphate transferase [contig 39] FULL Click for BLAST results 90% of length of longest homolog ( 255 nt / 282 nt ) Kwal_27.10209 - s27 (241628..241882) - YMR286W (MRPL33) - Mitochondrial ribosomal protein MRPL33 (YmL33) (E. coli L30) [contig 39] FULL Click for BLAST results 99% of length of longest homolog ( 333 nt / 336 nt ) Click for intergenic sequence Kwal_55.21333 - s55 complement(785624..785956) - YDR382W (RPP2B) - Ribosomal protein P2B (YP2beta) (L45) [contig 130] FULL Click for BLAST results 95% of length of longest homolog ( 954 nt / 1002 nt ) Click for intergenic sequence Click for intergenic sequence Kwal_55.21335 - s55 (786553..787506) - YOR130C (ORT1) - amino acid transporter [contig 130] FULL Click for BLAST results 93% of length of longest homolog ( 972 nt / 1050 nt ) Click for intergenic sequence Click for intergenic sequence Kwal_55.21338 - s55 complement(787531..788502) - YOR130C (ORT1) - amino acid transporter [contig 130] FULL Click for BLAST results Click for intergenic sequence 52% of length of longest homolog ( 189 nt / 366 nt ) Click for intergenic sequence Click for intergenic sequence Kwal_55.21341 - s55 (789203..789391) - YDR381C-A - Hypothetical ORF identified by homology.  See FEBS Letters [2000]487:31-36. [contig 130] FULL Click for BLAST results 41% of length of longest homolog ( 321 nt / 780 nt ) Click for intergenic sequence Kwal_55.21342 - s55 complement(789676..789996) - YDR381W (YRA1) - Nuclear RNA-binding RNA annealing protein [contig 130] FULL Click for BLAST results 88% of length of longest homolog ( 879 nt / 1002 nt ) YOR130C (ORT1) - Chr15 complement(569929..570807) - Ornithine transporter of the mitochondrial inner membrane, exports ornithine from mitochondria as part of arginine biosynthesis; human ortholog is associated with hyperammonaemia-hyperornithinaemia-homocitrullinuria (HHH) syndrome Click for Info Click for BLAST results 87% of length of longest homolog ( 876 nt / 1002 nt ) Smik_15.308 - Chr15 complement(531786..532661) - YOR130C (REAL) Click for BLAST results 88% of length of longest homolog ( 879 nt / 1002 nt ) Skud_15.292 - Chr15 complement(526144..527022) - YOR130C (REAL) Click for BLAST results 88% of length of longest homolog ( 879 nt / 1002 nt ) Suva_8.182 - Chr8 complement(327682..328560) - YOR130C (REAL) Click for BLAST results 90% of length of longest homolog ( 906 nt / 1002 nt ) CAGL0K10362g - Chr11 complement(1009984..1010889) - similar to uniprot|Q12375 Saccharomyces cerevisiae YOR130c ARG11 Click for BLAST results Click for intergenic sequence 91% of length of longest homolog ( 78 nt / 86 nt ) contains intron(s) Click for intergenic sequence KAFR0Ltrna6Y - Chr12 (368616..368655,368671..368708) - tRNA Type: Tyr (Y) 94% of length of longest homolog ( 1452 nt / 1542 nt ) KAFR0B03980 - Chr2 complement(832133..833584) - Anc_8.848 YMR283C Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 90% of length of longest homolog ( 255 nt / 282 nt ) Click for intergenic sequence KNAG0G03480 - Chr7 (745051..745305) - Anc_8.851 YMR286W Click for BLAST results 91% of length of longest homolog ( 912 nt / 1002 nt ) Click for intergenic sequence KNAG0B04110 - Chr2 (783740..784651) - Anc_5.461 YOR130C Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 90% of length of longest homolog ( 77 nt / 86 nt ) contains intron(s) Click for intergenic sequence NCAS0Btrna5Y - Chr2 complement(29203..29239,29251..29290) - tRNA Type: Tyr (Y) 95% of length of longest homolog ( 267 nt / 282 nt ) NCAS0B00260 - Chr2 complement(27274..27540) - Anc_8.851 YMR286W Click for BLAST results 100% of length of longest homolog ( 336 nt / 336 nt ) Click for intergenic sequence NCAS0H02180 - Chr8 (425168..425503) - Anc_5.462 Click for BLAST results 92% of length of longest homolog ( 918 nt / 1002 nt ) Click for intergenic sequence NCAS0H02170 - Chr8 complement(423631..424548) -  Click for BLAST results Click for intergenic sequence 100% of length of longest homolog ( 86 nt / 86 nt ) contains intron(s) Click for intergenic sequence NDAI0Etrna8Y - Chr5 complement(31633..31669,31633..31681) - tRNA Type: Tyr (Y) 100% of length of longest homolog ( 282 nt / 282 nt ) NDAI0E00250 - Chr5 complement(29470..29751) - Anc_8.851 YMR286W Click for BLAST results 100% of length of longest homolog ( 336 nt / 336 nt ) Click for intergenic sequence NDAI0C01460 - Chr3 complement(306586..306921) - Anc_5.462 Click for BLAST results 97% of length of longest homolog ( 969 nt / 1002 nt ) Click for intergenic sequence NDAI0C01470 - Chr3 (309948..310916) - Anc_5.461 Click for BLAST results 98% of length of longest homolog ( 330 nt / 336 nt ) Click for intergenic sequence TBLA0A02620 - Chr1 complement(638945..639274) - Anc_5.462 YDR382W Click for BLAST results 100% of length of longest homolog ( 1002 nt / 1002 nt ) Click for intergenic sequence Click for intergenic sequence TBLA0A02630 - Chr1 (640356..641357) - Anc_5.461 YOR130C Click for BLAST results Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 366 nt / 366 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence TBLA0A02640 - Chr1 (641685..641710,641776..642115) - Anc_5.459 YDR381C-A Click for BLAST results 96% of length of longest homolog ( 747 nt / 780 nt ) contains intron(s) Click for intergenic sequence TBLA0A02650 - Chr1 complement(642309..642773,643714..643995) - Anc_5.458 YDR381W Click for BLAST results 91% of length of longest homolog ( 909 nt / 1002 nt ) Click for intergenic sequence TPHA0E01570 - Chr5 (320205..321113) - Anc_5.461 YOR130C Click for BLAST results Click for intergenic sequence Click for intergenic sequence 93% of length of longest homolog ( 339 nt / 366 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence TPHA0E01580 - Chr5 (321492..321520,321632..321941) - Anc_5.459 YDR381C-A Click for BLAST results 97% of length of longest homolog ( 759 nt / 780 nt ) contains intron(s) Click for intergenic sequence TPHA0E01590 - Chr5 complement(322289..322756,324326..324616) - Anc_5.458 YDR381W Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 93% of length of longest homolog ( 261 nt / 282 nt ) Click for intergenic sequence Kpol_237.2 - s237 (2310..2570) - (2310..2570) [261 nt, 87 aa] Click for BLAST results 86% of length of longest homolog ( 900 nt / 1050 nt ) Kpol_440.6 - s440 (15656..16555) - (15656..16555) [900 nt, 300 aa] Click for BLAST results YGOB Tabulated Text Format