Hit NameLength (aa)HSP LengthHSP ScoreHSP Significance
Scas_596.280261251e-10
KLLA0F18766g6825680.023
BLASTP 2.2.26 [Sep-21-2011]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Scas_596.2
         (80 letters)

Database: blastdb 
           34,618 sequences; 16,596,109 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Scas_596.2                                                             53   1e-10
KLLA0F18766g complement(1725142..1725348) some similarities with...    31   0.023

>Scas_596.2
          Length = 80

 Score = 52.8 bits (125), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/26 (100%), Positives = 26/26 (100%)

Query: 55 KEESSCWSTCFKTMLCCCILEMCCSQ 80
          KEESSCWSTCFKTMLCCCILEMCCSQ
Sbjct: 55 KEESSCWSTCFKTMLCCCILEMCCSQ 80

>KLLA0F18766g complement(1725142..1725348) some similarities with
          sgd|S0007234 Saccharomyces cerevisiae YDR034wb
          questionable ORF - identified by SAGE, hypothetical
          start
          Length = 68

 Score = 30.8 bits (68), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 12/25 (48%), Positives = 19/25 (76%)

Query: 55 KEESSCWSTCFKTMLCCCILEMCCS 79
          +++S C  TC K ++CCC+ E+CCS
Sbjct: 39 RQDSGCCGTCCKALMCCCLFELCCS 63

  Database: blastdb
    Posted date:  Apr 3, 2006  3:33 PM
  Number of letters in database: 16,596,109
  Number of sequences in database:  34,618
  
Lambda     K      H
   0.332    0.128    0.512 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 34618
Number of Hits to DB: 734,343
Number of extensions: 9149
Number of successful extensions: 52
Number of sequences better than 10.0: 8
Number of HSP's gapped: 52
Number of HSP's successfully gapped: 8
Length of query: 80
Length of database: 16,596,109
Length adjustment: 52
Effective length of query: 28
Effective length of database: 14,795,973
Effective search space: 414287244
Effective search space used: 414287244
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 54 (25.4 bits)