Hit NameLength (aa)HSP LengthHSP ScoreHSP Significance
Kwal_56.234011091095733e-78
Sklu_1568.1127894097e-53
AGR156C1271093821e-48
KLLA0C11935g150873725e-47
CAGL0I08635g1391033578e-45
YER159C (BUR6)142973534e-44
Scas_576.1*90863042e-37
Kwal_26.6856138931423e-12
ADR391W145881345e-11
KLLA0A03696g156881329e-11
Sklu_2404.2164881321e-10
YOR358W (HAP5)242881297e-10
CAGL0K09900g201881261e-09
Scas_663.18219761131e-07
Sklu_913.118186865e-04
KLLA0F01859g16679780.005
Scas_644.713176770.007
Sklu_1188.113476710.044
ACL017C13375710.049
Kwal_56.2251713474700.064
KLLA0C05918g13273670.15
Kwal_27.1099913272660.18
Kwal_27.1159913172660.20
CAGL0C04411g13172660.22
Scas_482.111072650.24
YOL012C (HTZ1)13476650.25
CAGL0K11440g13172650.25
YDR225W (HTA1)13272650.29
YBL003C (HTA2)13272650.29
Scas_721.8313272650.29
Sklu_1763.113272650.30
KLLA0E22583g114487660.31
KLLA0F13332g13072640.33
KLLA0E17413g13072640.33
Sklu_890.113172640.34
AEL003C13172640.37
AGR184W17572650.40
AEL159W18383640.45
Kwal_0.2619996611.2
YBR278W (DPB3)20180601.7
Scas_555.10212666584.0
CAGL0K00451g26844574.1
Scas_674.25*88333566.8
BLASTP 2.2.26 [Sep-21-2011]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Kwal_56.23401
         (109 letters)

Database: blastdb 
           34,618 sequences; 16,596,109 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Kwal_56.23401                                                         225   3e-78
Sklu_1568.1 YER159C, Contig c1568 2406-2789 reverse complement        162   7e-53
AGR156C [4467] [Homologous to ScYER159C (BUR6) - SH] (1042863..1...   151   1e-48
KLLA0C11935g complement(1026490..1026942) some similarities with...   147   5e-47
CAGL0I08635g complement(842539..842958) no similarity, hypotheti...   142   8e-45
YER159C (BUR6) [1588] chr5 complement(491525..491953) Alpha subu...   140   4e-44
Scas_576.1*                                                           121   2e-37
Kwal_26.6856                                                           59   3e-12
ADR391W [2132] [Homologous to ScYOR358W (HAP5) - SH] complement(...    56   5e-11
KLLA0A03696g complement(334065..334535) similar to sp|Q02516 Sac...    55   9e-11
Sklu_2404.2 YOR358W, Contig c2404 859-1353 reverse complement          55   1e-10
YOR358W (HAP5) [5135] chr15 (1010157..1010885) Component (with H...    54   7e-10
CAGL0K09900g 968269..968874 similar to sp|Q02516 Saccharomyces c...    53   1e-09
Scas_663.18                                                            48   1e-07
Sklu_913.1 YJL065C, Contig c913 1211-1756                              38   5e-04
KLLA0F01859g 170883..171383 some similarities with sp|P40366 Sac...    35   0.005
Scas_644.7                                                             34   0.007
Sklu_1188.1 YOL012C, Contig c1188 570-974 reverse complement           32   0.044
ACL017C [1032] [Homologous to ScYOL012C (HTZ1) - SH] (330555..33...    32   0.049
Kwal_56.22517                                                          32   0.064
KLLA0C05918g complement(522995..523393) similar to sp|Q12692 Sac...    30   0.15 
Kwal_27.10999                                                          30   0.18 
Kwal_27.11599                                                          30   0.20 
CAGL0C04411g 426015..426410 highly similar to sp|P04911 Saccharo...    30   0.22 
Scas_482.1                                                             30   0.24 
YOL012C (HTZ1) [4804] chr15 complement(303579..303983) Histone-r...    30   0.25 
CAGL0K11440g complement(1111362..1111757) highly similar to sp|P...    30   0.25 
YDR225W (HTA1) [1061] chr4 (915522..915920) Histone H2A, nearly ...    30   0.29 
YBL003C (HTA2) [191] chr2 complement(235359..235757) Histone H2A...    30   0.29 
Scas_721.83                                                            30   0.29 
Sklu_1763.1 YDR225W, Contig c1763 299-697 reverse complement           30   0.30 
KLLA0E22583g 2003803..2007237 weakly similar to sp|P47108 Saccha...    30   0.31 
KLLA0F13332g 1230744..1231136 some similarities with sp|P04911 S...    29   0.33 
KLLA0E17413g 1539714..1540106 some similarities with sp|P04911 S...    29   0.33 
Sklu_890.1 , Contig c890 480-875 reverse complement                    29   0.34 
AEL003C [2503] [Homologous to ScYBL003C (HTA2) - SH] (631732..63...    29   0.37 
AGR184W [4495] [Homologous to ScYDR225W (HTA1) - SH] complement(...    30   0.40 
AEL159W [2347] [Homologous to ScYJL065C - SH; ScYBR278W (DPB3) -...    29   0.45 
Kwal_0.26                                                              28   1.2  
YBR278W (DPB3) [456] chr2 (760252..760857) DNA polymerase epsilo...    28   1.7  
Scas_555.10                                                            27   4.0  
CAGL0K00451g complement(45703..46509) weakly similar to sp|P3604...    27   4.1  
Scas_674.25*                                                           26   6.8  

>Kwal_56.23401
          Length = 109

 Score =  225 bits (573), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 109/109 (100%), Positives = 109/109 (100%)

Query: 1   MSENQGSEVFGNIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGH 60
           MSENQGSEVFGNIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGH
Sbjct: 1   MSENQGSEVFGNIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGH 60

Query: 61  VAKEMGCRRISGEVMKKTIMTDEKFDFLRELICGEHASKPTDEEDPEGA 109
           VAKEMGCRRISGEVMKKTIMTDEKFDFLRELICGEHASKPTDEEDPEGA
Sbjct: 61  VAKEMGCRRISGEVMKKTIMTDEKFDFLRELICGEHASKPTDEEDPEGA 109

>Sklu_1568.1 YER159C, Contig c1568 2406-2789 reverse complement
          Length = 127

 Score =  162 bits (409), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 74/89 (83%), Positives = 84/89 (94%)

Query: 8   EVFGNIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKEMGC 67
           +VF  IKTHFPPAK+KKIMQTDEDIGKVSQATPVITGRSLEFFIA+LV++S  VA+EMGC
Sbjct: 12  QVFTKIKTHFPPAKVKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVSKSSDVAREMGC 71

Query: 68  RRISGEVMKKTIMTDEKFDFLRELICGEH 96
           +RISG+VMKKTIMTDEKFDFLRE++CG H
Sbjct: 72  KRISGDVMKKTIMTDEKFDFLREIVCGTH 100

>AGR156C [4467] [Homologous to ScYER159C (BUR6) - SH]
           (1042863..1043246) [384 bp, 127 aa]
          Length = 127

 Score =  151 bits (382), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 78/109 (71%), Positives = 87/109 (79%), Gaps = 5/109 (4%)

Query: 6   GSEVFGNIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKEM 65
           G+  F  IKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLV++S  +AKE 
Sbjct: 13  GNSPFDKIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVDKSSQMAKEQ 72

Query: 66  GCRRISGEVMKKTIMTDEKFDFLRELICGE---HASKPTD--EEDPEGA 109
           G +RISG++MKKTIM DEKFDFLRE++C E   H     D  E D EGA
Sbjct: 73  GSKRISGDIMKKTIMADEKFDFLREIVCPEAVKHEDSTHDDAEADVEGA 121

>KLLA0C11935g complement(1026490..1026942) some similarities with
           sp|P40096 Saccharomyces cerevisiae YER159c NCB1
           functional homolog of human NC2alpha singleton,
           hypothetical start
          Length = 150

 Score =  147 bits (372), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 68/87 (78%), Positives = 79/87 (90%)

Query: 7   SEVFGNIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKEMG 66
           +EVF  IKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIA+LV++S  VA++ G
Sbjct: 60  AEVFDKIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQG 119

Query: 67  CRRISGEVMKKTIMTDEKFDFLRELIC 93
            +RIS ++MKKTI+TDEKFDFLRE+I 
Sbjct: 120 SKRISADIMKKTILTDEKFDFLREVIL 146

>CAGL0I08635g complement(842539..842958) no similarity, hypothetical
           start
          Length = 139

 Score =  142 bits (357), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 64/103 (62%), Positives = 85/103 (82%)

Query: 2   SENQGSEVFGNIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHV 61
           ++++ +EVF  IKTHFPPAK+KKIMQ+DEDIGKVSQATPVITGRSLEFF+A+LV +SG +
Sbjct: 35  AKDETTEVFEKIKTHFPPAKVKKIMQSDEDIGKVSQATPVITGRSLEFFMALLVKKSGDM 94

Query: 62  AKEMGCRRISGEVMKKTIMTDEKFDFLRELICGEHASKPTDEE 104
           A++ G +RI+ +V++ TI+ DE+FDFLRE IC  +     DEE
Sbjct: 95  ARQRGMKRITADVLRDTILEDERFDFLRESICAGYKGYKEDEE 137

>YER159C (BUR6) [1588] chr5 complement(491525..491953) Alpha subunit
           of NC2 (Dr1/Drap1) regulator of class II transcription,
           contains a histone fold domain [429 bp, 142 aa]
          Length = 142

 Score =  140 bits (353), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 66/97 (68%), Positives = 79/97 (81%)

Query: 8   EVFGNIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKEMGC 67
           +VF  IKTHFPPAK+KKIMQTDEDIGKVSQATPVI GRSLEFFIA+LV +SG +A+  G 
Sbjct: 44  DVFDRIKTHFPPAKVKKIMQTDEDIGKVSQATPVIAGRSLEFFIALLVKKSGEMARGQGT 103

Query: 68  RRISGEVMKKTIMTDEKFDFLRELICGEHASKPTDEE 104
           +RI+ E++KKTI+ DEKFDFLRE +C E      +EE
Sbjct: 104 KRITAEILKKTILNDEKFDFLREGLCVEEGQTQPEEE 140

>Scas_576.1*
          Length = 90

 Score =  121 bits (304), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 56/86 (65%), Positives = 73/86 (84%), Gaps = 1/86 (1%)

Query: 8  EVFGNIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKEMGC 67
          EVF  +KTHFPPAK+K I+Q+ +DIGKV QATPVI GR+LEFFIA+LV +SG VA++ G 
Sbjct: 6  EVFDRLKTHFPPAKVK-ILQSYDDIGKVFQATPVIAGRALEFFIALLVKKSGDVARKNGT 64

Query: 68 RRISGEVMKKTIMTDEKFDFLRELIC 93
          +RI+ +V+K+TI+TDEK DFLRE +C
Sbjct: 65 KRITADVLKQTILTDEKLDFLRENVC 90

>Kwal_26.6856
          Length = 138

 Score = 59.3 bits (142), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 1/93 (1%)

Query: 1   MSENQGSEVFGNIKTH-FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSG 59
           M+   GS    + K+H  P A+IKK+M+TDED+  +S   P++  ++ E FI  L  R+ 
Sbjct: 41  MTNEPGSSYQDDFKSHSLPLARIKKVMKTDEDVRMISAEAPILFAKACEIFITELTMRAW 100

Query: 60  HVAKEMGCRRISGEVMKKTIMTDEKFDFLRELI 92
            +A+E   R +    + + ++  + FDFL +++
Sbjct: 101 CIAEEHKRRTLQKSDIAQALLKSDMFDFLIDIV 133

>ADR391W [2132] [Homologous to ScYOR358W (HAP5) - SH]
           complement(1410823..1411260) [438 bp, 145 aa]
          Length = 145

 Score = 56.2 bits (134), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 1/88 (1%)

Query: 6   GSEVFGNIKTH-FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKE 64
           GS    + K+H  P A+IKK+M+TDED+  +S   P++  ++ E FI  L  R+  +A+E
Sbjct: 53  GSPHRDDFKSHSLPLARIKKVMKTDEDVKMISAEAPILFAKACEIFITELTMRAWCIAEE 112

Query: 65  MGCRRISGEVMKKTIMTDEKFDFLRELI 92
              R +  + + + +   + FDFL +++
Sbjct: 113 NKRRTLQKQDIAQALQKSDMFDFLIDIV 140

>KLLA0A03696g complement(334065..334535) similar to sp|Q02516
           Saccharomyces cerevisiae YOR358w HAP5 CCAAT-binding
           factor subunit singleton, hypothetical start
          Length = 156

 Score = 55.5 bits (132), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 1/88 (1%)

Query: 6   GSEVFGNIKTH-FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKE 64
           GS+   + K+H  P A+IKK+M+TDE++  +S   P++  ++ E FI  L  R+  VA+E
Sbjct: 64  GSQFQDDFKSHSLPLARIKKVMKTDEEVRMISGEAPILFAKACEIFITELTMRAWCVAEE 123

Query: 65  MGCRRISGEVMKKTIMTDEKFDFLRELI 92
              R +  + +   +   + FDFL +++
Sbjct: 124 NKRRTLQKQDIADALQKSDMFDFLIDIV 151

>Sklu_2404.2 YOR358W, Contig c2404 859-1353 reverse complement
          Length = 164

 Score = 55.5 bits (132), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 1/88 (1%)

Query: 6   GSEVFGNIKTH-FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKE 64
           GS    + ++H  P A+IKK+M+TDED+  +S   P++  ++ E F+  L  R+  VA+E
Sbjct: 71  GSNTRDDFRSHSLPLARIKKVMKTDEDVRMISAEAPILFAKACEIFVTELTMRAWCVAEE 130

Query: 65  MGCRRISGEVMKKTIMTDEKFDFLRELI 92
              R +    + + +   + FDFL +++
Sbjct: 131 SKRRTLQKADIAEALQKSDMFDFLIDIV 158

>YOR358W (HAP5) [5135] chr15 (1010157..1010885) Component (with
           Hap2p, Hap3p, and Hap4p) of heterotrimeric CCAAT-binding
           factor [729 bp, 242 aa]
          Length = 242

 Score = 54.3 bits (129), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 1/88 (1%)

Query: 6   GSEVFGNIKTH-FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKE 64
           GSE   + K+H  P A+I+K+M+TDED+  +S   P+I  ++ E FI  L  R+  VA+ 
Sbjct: 148 GSEHQDDFKSHSLPFARIRKVMKTDEDVKMISAEAPIIFAKACEIFITELTMRAWCVAER 207

Query: 65  MGCRRISGEVMKKTIMTDEKFDFLRELI 92
              R +    + + +   + FDFL +++
Sbjct: 208 NKRRTLQKADIAEALQKSDMFDFLIDVV 235

>CAGL0K09900g 968269..968874 similar to sp|Q02516 Saccharomyces
           cerevisiae YOR358w HAP5 CCAAT-binding factor subunit,
           hypothetical start
          Length = 201

 Score = 53.1 bits (126), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 51/88 (57%), Gaps = 1/88 (1%)

Query: 6   GSEVFGNIKTH-FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKE 64
           GSE   + K+H  P A+I+++M+TDE++  +S   P+I  ++ E FI  L  R+  VA++
Sbjct: 102 GSEYQDDFKSHSLPFARIRRVMKTDEEVKMISAEAPIIFAKACEVFITELTMRAWCVAEK 161

Query: 65  MGCRRISGEVMKKTIMTDEKFDFLRELI 92
              R +    + + +   + FDFL +++
Sbjct: 162 HKRRTLQKADIAEALQMSDMFDFLIDIV 189

>Scas_663.18
          Length = 219

 Score = 48.1 bits (113), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 43/76 (56%)

Query: 17  FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKEMGCRRISGEVMK 76
            P A+I+K+M+TDED+  +S   P+I  ++ E FI  L  R+  VA+    R +    + 
Sbjct: 135 LPFARIRKVMKTDEDVRMISAEVPIIFAKACEIFITELTMRAWCVAENNRRRTLQKADIA 194

Query: 77  KTIMTDEKFDFLRELI 92
           + +   + +DFL +++
Sbjct: 195 EALKKCDMYDFLIDIV 210

>Sklu_913.1 YJL065C, Contig c913 1211-1756
          Length = 181

 Score = 37.7 bits (86), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 10/86 (11%)

Query: 14 KTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFI------AMLVNR-SGHVAKEMG 66
          + H P +K K+I +TD D    SQA  V T  + E FI      AMLV++   + AK + 
Sbjct: 16 RPHLPVSKCKRIAKTDPDCILTSQAAYVATAFATELFIQNFVEEAMLVSQLEKNNAKSV- 74

Query: 67 CRRISGEVMKKTIMTDEKFDFLRELI 92
            R++ + + K +   +KF FL +++
Sbjct: 75 --RLTYDNLAKCVSRLDKFIFLGDVV 98

>KLLA0F01859g 170883..171383 some similarities with sp|P40366
          Saccharomyces cerevisiae YJL065c singleton,
          hypothetical start
          Length = 166

 Score = 34.7 bits (78), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 3/79 (3%)

Query: 17 FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVA---KEMGCRRISGE 73
           P +K KKI +TD +    SQA    T  + E FI ML   +  +A   K+    R++ E
Sbjct: 11 IPISKCKKIARTDPEYILTSQAAFAATAFTTELFIQMLAEETCSLAQIHKQTKTLRLNYE 70

Query: 74 VMKKTIMTDEKFDFLRELI 92
           +   I   +KF FL +++
Sbjct: 71 DLSTAIRNLDKFQFLSDVV 89

>Scas_644.7
          Length = 131

 Score = 34.3 bits (77), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 5/76 (6%)

Query: 16  HFPPAKIKKIMQTDEDIGKV---SQATPVITGRSLEFFIAMLVNRSGHVAKEMGCRRISG 72
            FP  +IK+ ++ +   GKV   S+A   +T   LE+  A ++  +G+ AK++  +RI+ 
Sbjct: 31  QFPVGRIKRYLKRNAS-GKVRVGSKAAIYLTA-VLEYLTAEVLELAGNAAKDLKVKRITP 88

Query: 73  EVMKKTIMTDEKFDFL 88
             ++  I  D++ D L
Sbjct: 89  RHLQLAIRGDDELDSL 104

>Sklu_1188.1 YOL012C, Contig c1188 570-974 reverse complement
          Length = 134

 Score = 32.0 bits (71), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 5/76 (6%)

Query: 16  HFPPAKIKKIMQTDEDIGKV---SQATPVITGRSLEFFIAMLVNRSGHVAKEMGCRRISG 72
            FP  +IK+ ++ +   GK    S+A   +T   LE+  A ++  +G+ AK++  +RI+ 
Sbjct: 32  QFPVGRIKRYLKKNA-AGKTRVGSKAAIYLTA-VLEYLTAEVLELAGNAAKDLKVKRITP 89

Query: 73  EVMKKTIMTDEKFDFL 88
             ++  I  D++ D L
Sbjct: 90  RHLQLAIRGDDELDTL 105

>ACL017C [1032] [Homologous to ScYOL012C (HTZ1) - SH]
           (330555..330956) [402 bp, 133 aa]
          Length = 133

 Score = 32.0 bits (71), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 5/75 (6%)

Query: 17  FPPAKIKKIMQTDEDIGKV---SQATPVITGRSLEFFIAMLVNRSGHVAKEMGCRRISGE 73
           FP  +IK+ ++ +   GK    S+A   +T   LE+  A ++  +G+ AK++  +RI+  
Sbjct: 33  FPVGRIKRYLKKNA-AGKTRVGSKAAIYLTA-VLEYLTAEVLELAGNAAKDLKVKRITPR 90

Query: 74  VMKKTIMTDEKFDFL 88
            ++  I  D++ D L
Sbjct: 91  HLQLAIRGDDELDSL 105

>Kwal_56.22517
          Length = 134

 Score = 31.6 bits (70), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 1/74 (1%)

Query: 16  HFPPAKIKKIMQTDE-DIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKEMGCRRISGEV 74
            FP  +IK+ ++ +     +V   + +     LE+  A ++  +G+ AK++  +RI+   
Sbjct: 32  QFPVGRIKRYLKRNAAGRTRVGSKSAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRH 91

Query: 75  MKKTIMTDEKFDFL 88
           ++  I  D++ D L
Sbjct: 92  LQLAIRGDDELDTL 105

>KLLA0C05918g complement(522995..523393) similar to sp|Q12692
           Saccharomyces cerevisiae YOL012c HTZ1 evolutionarily
           conserved member of the histone H2A F/Z family of
           histone variants, start by similarity
          Length = 132

 Score = 30.4 bits (67), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 16/73 (21%), Positives = 37/73 (50%), Gaps = 1/73 (1%)

Query: 17  FPPAKIKKIMQTDE-DIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKEMGCRRISGEVM 75
           FP  ++K+ ++ +     +V     +     LE+  A ++  +G+ AK++  +RI+   +
Sbjct: 33  FPVGRVKRYLKRNAAGRTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHL 92

Query: 76  KKTIMTDEKFDFL 88
           +  I  D++ D L
Sbjct: 93  QLAIRGDDELDSL 105

>Kwal_27.10999
          Length = 132

 Score = 30.0 bits (66), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 15/72 (20%), Positives = 34/72 (47%)

Query: 17 FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKEMGCRRISGEVMK 76
          FP  ++ ++++      +V    PV     LE+  A ++  +G+ A++    RI    ++
Sbjct: 27 FPVGRVHRLLRRGNYAQRVGSGAPVYMTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQ 86

Query: 77 KTIMTDEKFDFL 88
            I  D++ + L
Sbjct: 87 LAIRNDDELNKL 98

>Kwal_27.11599
          Length = 131

 Score = 30.0 bits (66), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 15/72 (20%), Positives = 34/72 (47%)

Query: 17 FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKEMGCRRISGEVMK 76
          FP  ++ ++++      +V    PV     LE+  A ++  +G+ A++    RI    ++
Sbjct: 26 FPVGRVHRLLRRGNYAQRVGSGAPVYMTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQ 85

Query: 77 KTIMTDEKFDFL 88
            I  D++ + L
Sbjct: 86 LAIRNDDELNKL 97

>CAGL0C04411g 426015..426410 highly similar to sp|P04911
          Saccharomyces cerevisiae YDR225w HTA1 or sp|P04912
          Saccharomyces cerevisiae YBL003c HTA2, start by
          similarity
          Length = 131

 Score = 30.0 bits (66), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 14/72 (19%), Positives = 34/72 (47%)

Query: 17 FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKEMGCRRISGEVMK 76
          FP  ++ ++++      ++    PV     LE+  A ++  +G+ A++    RI    ++
Sbjct: 27 FPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKSRIIPRHLQ 86

Query: 77 KTIMTDEKFDFL 88
            I  D++ + L
Sbjct: 87 LAIRNDDELNKL 98

>Scas_482.1
          Length = 110

 Score = 29.6 bits (65), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 14/72 (19%), Positives = 34/72 (47%)

Query: 17 FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKEMGCRRISGEVMK 76
          FP  ++ ++++      ++    PV     LE+  A ++  +G+ A++    RI    ++
Sbjct: 5  FPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQ 64

Query: 77 KTIMTDEKFDFL 88
            I  D++ + L
Sbjct: 65 LAIRNDDELNKL 76

>YOL012C (HTZ1) [4804] chr15 complement(303579..303983)
           Histone-related protein, involved in silencing, required
           for GAL gene induction [405 bp, 134 aa]
          Length = 134

 Score = 29.6 bits (65), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 5/76 (6%)

Query: 16  HFPPAKIKKIMQTDEDIGKV---SQATPVITGRSLEFFIAMLVNRSGHVAKEMGCRRISG 72
            FP  +IK+ ++     G+    S+A   +T   LE+  A ++  +G+ AK++  +RI+ 
Sbjct: 32  QFPVGRIKRYLKR-HATGRTRVGSKAAIYLTA-VLEYLTAEVLELAGNAAKDLKVKRITP 89

Query: 73  EVMKKTIMTDEKFDFL 88
             ++  I  D++ D L
Sbjct: 90  RHLQLAIRGDDELDSL 105

>CAGL0K11440g complement(1111362..1111757) highly similar to
          sp|P04911 Saccharomyces cerevisiae YDR225w HTA1 or
          sp|P04912 Saccharomyces cerevisiae YBL003c HTA2, start
          by similarity
          Length = 131

 Score = 29.6 bits (65), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 14/72 (19%), Positives = 34/72 (47%)

Query: 17 FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKEMGCRRISGEVMK 76
          FP  ++ ++++      ++    PV     LE+  A ++  +G+ A++    RI    ++
Sbjct: 27 FPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKSRIIPRHLQ 86

Query: 77 KTIMTDEKFDFL 88
            I  D++ + L
Sbjct: 87 LAIRNDDELNKL 98

>YDR225W (HTA1) [1061] chr4 (915522..915920) Histone H2A, nearly
          identical to Hta2p [399 bp, 132 aa]
          Length = 132

 Score = 29.6 bits (65), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 14/72 (19%), Positives = 34/72 (47%)

Query: 17 FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKEMGCRRISGEVMK 76
          FP  ++ ++++      ++    PV     LE+  A ++  +G+ A++    RI    ++
Sbjct: 27 FPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQ 86

Query: 77 KTIMTDEKFDFL 88
            I  D++ + L
Sbjct: 87 LAIRNDDELNKL 98

>YBL003C (HTA2) [191] chr2 complement(235359..235757) Histone H2A,
          nearly identical to Hta1p [399 bp, 132 aa]
          Length = 132

 Score = 29.6 bits (65), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 14/72 (19%), Positives = 34/72 (47%)

Query: 17 FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKEMGCRRISGEVMK 76
          FP  ++ ++++      ++    PV     LE+  A ++  +G+ A++    RI    ++
Sbjct: 27 FPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQ 86

Query: 77 KTIMTDEKFDFL 88
            I  D++ + L
Sbjct: 87 LAIRNDDELNKL 98

>Scas_721.83
          Length = 132

 Score = 29.6 bits (65), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 14/72 (19%), Positives = 34/72 (47%)

Query: 17 FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKEMGCRRISGEVMK 76
          FP  ++ ++++      ++    PV     LE+  A ++  +G+ A++    RI    ++
Sbjct: 27 FPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQ 86

Query: 77 KTIMTDEKFDFL 88
            I  D++ + L
Sbjct: 87 LAIRNDDELNKL 98

>Sklu_1763.1 YDR225W, Contig c1763 299-697 reverse complement
          Length = 132

 Score = 29.6 bits (65), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 14/72 (19%), Positives = 34/72 (47%)

Query: 17 FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKEMGCRRISGEVMK 76
          FP  ++ ++++      ++    PV     LE+  A ++  +G+ A++    RI    ++
Sbjct: 27 FPVGRVHRLLRKGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQ 86

Query: 77 KTIMTDEKFDFL 88
            I  D++ + L
Sbjct: 87 LAIRNDDELNKL 98

>KLLA0E22583g 2003803..2007237 weakly similar to sp|P47108
           Saccharomyces cerevisiae YJR041c singleton, start by
           similarity
          Length = 1144

 Score = 30.0 bits (66), Expect = 0.31,   Method: Composition-based stats.
 Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 5/87 (5%)

Query: 12  NIKTHFP-PAKIKKIMQTDEDIGKVSQATPVIT---GRSLEFFIAM-LVNRSGHVAKEMG 66
           N KT  P P    K      DI   S    V T     ++E+ +A  L+ R   V+KEM 
Sbjct: 780 NSKTTIPVPPLFSKASAIPSDIEVQSAYFMVSTLNYNDNIEYLLAQYLILRENGVSKEML 839

Query: 67  CRRISGEVMKKTIMTDEKFDFLRELIC 93
            + I   + K+ I  DE F+   E IC
Sbjct: 840 LQAIKLNISKRIINNDEDFNTAFETIC 866

>KLLA0F13332g 1230744..1231136 some similarities with sp|P04911
          Saccharomyces cerevisiae YDR225w HTA1 histone H2A,
          hypothetical start
          Length = 130

 Score = 29.3 bits (64), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 14/72 (19%), Positives = 34/72 (47%)

Query: 17 FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKEMGCRRISGEVMK 76
          FP  ++ ++++      ++    PV     LE+  A ++  +G+ A++    RI    ++
Sbjct: 26 FPVGRVHRLLRKGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQ 85

Query: 77 KTIMTDEKFDFL 88
            I  D++ + L
Sbjct: 86 LAIRNDDELNKL 97

>KLLA0E17413g 1539714..1540106 some similarities with sp|P04911
          Saccharomyces cerevisiae YDR225w HTA1 histone H2A,
          hypothetical start
          Length = 130

 Score = 29.3 bits (64), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 14/72 (19%), Positives = 34/72 (47%)

Query: 17 FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKEMGCRRISGEVMK 76
          FP  ++ ++++      ++    PV     LE+  A ++  +G+ A++    RI    ++
Sbjct: 26 FPVGRVHRLLRKGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQ 85

Query: 77 KTIMTDEKFDFL 88
            I  D++ + L
Sbjct: 86 LAIRNDDELNKL 97

>Sklu_890.1 , Contig c890 480-875 reverse complement
          Length = 131

 Score = 29.3 bits (64), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 14/72 (19%), Positives = 34/72 (47%)

Query: 17 FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKEMGCRRISGEVMK 76
          FP  ++ ++++      ++    PV     LE+  A ++  +G+ A++    RI    ++
Sbjct: 26 FPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQ 85

Query: 77 KTIMTDEKFDFL 88
            I  D++ + L
Sbjct: 86 LAIRNDDELNKL 97

>AEL003C [2503] [Homologous to ScYBL003C (HTA2) - SH]
          (631732..632127) [396 bp, 131 aa]
          Length = 131

 Score = 29.3 bits (64), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 14/72 (19%), Positives = 34/72 (47%)

Query: 17 FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKEMGCRRISGEVMK 76
          FP  ++ ++++      ++    PV     LE+  A ++  +G+ A++    RI    ++
Sbjct: 26 FPVGRVHRLLRKGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQ 85

Query: 77 KTIMTDEKFDFL 88
            I  D++ + L
Sbjct: 86 LAIRNDDELNKL 97

>AGR184W [4495] [Homologous to ScYDR225W (HTA1) - SH]
           complement(1095987..1096514) [528 bp, 175 aa]
          Length = 175

 Score = 29.6 bits (65), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 14/72 (19%), Positives = 34/72 (47%)

Query: 17  FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAKEMGCRRISGEVMK 76
           FP  ++ ++++      ++    PV     LE+  A ++  +G+ A++    RI    ++
Sbjct: 70  FPVGRVHRLLRKGNYAQRIGSGAPVYMTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQ 129

Query: 77  KTIMTDEKFDFL 88
             I  D++ + L
Sbjct: 130 LAIRNDDELNKL 141

>AEL159W [2347] [Homologous to ScYJL065C - SH; ScYBR278W (DPB3) -
          SH] complement(333197..333748) [552 bp, 183 aa]
          Length = 183

 Score = 29.3 bits (64), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 6/83 (7%)

Query: 16 HFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFI------AMLVNRSGHVAKEMGCRR 69
            P +K K+I +TD D    +QA  + T  + E F+      AM   +           R
Sbjct: 12 RLPISKCKRIAKTDPDYIMTTQAAYIATAFATELFVQAISEDAMAQAQLDGRRAGGRAAR 71

Query: 70 ISGEVMKKTIMTDEKFDFLRELI 92
          ++   + +++  +E++ FL ++I
Sbjct: 72 LTYNDLARSVAREERYAFLADVI 94

>Kwal_0.26
          Length = 199

 Score = 28.1 bits (61), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 19/96 (19%), Positives = 39/96 (40%), Gaps = 4/96 (4%)

Query: 1  MSENQGSEVFGNIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNR--- 57
          M  +  +E         P +K+K+I + D D    SQ+       + E F+ +       
Sbjct: 1  MEGSNATEAVKKTAPKLPISKVKRIAKADPDYIICSQSATAALAFATELFVQVFSEEGLA 60

Query: 58 SGHVAKEMGCR-RISGEVMKKTIMTDEKFDFLRELI 92
             + +  G R  +  + +   + T ++F FL ++I
Sbjct: 61 KSQLDRPAGSRLTLRYDDLASCVATSDRFAFLSDVI 96

>YBR278W (DPB3) [456] chr2 (760252..760857) DNA polymerase epsilon
          third subunit [606 bp, 201 aa]
          Length = 201

 Score = 27.7 bits (60), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 4/80 (5%)

Query: 17 FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVA----KEMGCRRISG 72
          FP +K+KKI + D +    S      T  + E F+  LV  S  +A    K     R+S 
Sbjct: 12 FPISKVKKIAKCDPEYVITSNVAISATAFAAELFVQNLVEESLVLAQLNSKGKTSLRLSL 71

Query: 73 EVMKKTIMTDEKFDFLRELI 92
            +++ +   + F FL + I
Sbjct: 72 NSIEECVEKRDNFRFLEDAI 91

>Scas_555.10
          Length = 2126

 Score = 26.9 bits (58), Expect = 4.0,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 4/66 (6%)

Query: 18  PP---AKIKKIMQTDEDIGKVSQATPVITGRSLE-FFIAMLVNRSGHVAKEMGCRRISGE 73
           PP   A++ KI    E +  +S +  + T + L+   I  + +  G V KEM C++ + +
Sbjct: 895 PPRSSARLSKITTISEPMPIISNSPRLTTSQDLDDKKITGIGDIDGPVVKEMSCKQSNKQ 954

Query: 74  VMKKTI 79
           ++ K+I
Sbjct: 955 ILMKSI 960

>CAGL0K00451g complement(45703..46509) weakly similar to sp|P36040
           Saccharomyces cerevisiae YKL206c, hypothetical start
          Length = 268

 Score = 26.6 bits (57), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 12  NIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLV 55
           N KT F  A I+   Q DE I  + Q TP+I G    F +  L+
Sbjct: 60  NGKTLFSSA-IELFKQKDEQIYVIQQRTPIIPGYLNNFIVETLI 102

>Scas_674.25*
          Length = 883

 Score = 26.2 bits (56), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 9/33 (27%), Positives = 19/33 (57%)

Query: 60  HVAKEMGCRRISGEVMKKTIMTDEKFDFLRELI 92
           H  K++  R  + ++ KK ++   KFD ++ L+
Sbjct: 830 HYKKDLLKREFASDMKKKLVLARNKFDVIKNLV 862

  Database: blastdb
    Posted date:  Apr 3, 2006  3:33 PM
  Number of letters in database: 16,596,109
  Number of sequences in database:  34,618
  
Lambda     K      H
   0.316    0.133    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 34618
Number of Hits to DB: 3,477,342
Number of extensions: 114484
Number of successful extensions: 338
Number of sequences better than 10.0: 46
Number of HSP's gapped: 337
Number of HSP's successfully gapped: 46
Length of query: 109
Length of database: 16,596,109
Length adjustment: 79
Effective length of query: 30
Effective length of database: 13,861,287
Effective search space: 415838610
Effective search space used: 415838610
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)