Hit NameLength (aa)HSP LengthHSP ScoreHSP Significance
KLLA0C11935g1501487212e-99
AGR156C127864024e-51
Sklu_1568.1127863842e-48
Kwal_56.23401109903735e-47
YER159C (BUR6)142843695e-46
CAGL0I08635g139863565e-44
Scas_576.1*90833186e-39
Kwal_26.6856138831296e-10
ADR391W145831227e-09
YOR358W (HAP5)242901204e-08
Sklu_2404.2164831166e-08
KLLA0A03696g156831158e-08
CAGL0K09900g201881161e-07
Scas_663.18219761108e-07
Sklu_913.1181831001e-05
Kwal_0.2619993780.016
Kwal_27.1159913172730.044
Kwal_27.1099913272730.047
KLLA0F01859g16682730.054
Scas_675.1530599740.062
CAGL0C04411g13172710.078
Scas_482.111072700.078
CAGL0K11440g13172710.081
AGR184W17572720.087
Sklu_890.113172710.093
KLLA0F13332g13072700.094
KLLA0E17413g13072700.094
YDR225W (HTA1)13272700.095
YBL003C (HTA2)13272700.095
Scas_721.8313272700.095
Sklu_1763.113272700.10
AEL003C13172700.10
YBR278W (DPB3)20180710.12
AEL159W18383680.31
Scas_644.713180640.62
Kwal_27.9948246996631.7
Sklu_1188.113475602.7
Kwal_56.2251713473593.1
ACL017C13375593.4
BLASTP 2.2.26 [Sep-21-2011]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= KLLA0C11935g
         (148 letters)

Database: blastdb 
           34,618 sequences; 16,596,109 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KLLA0C11935g complement(1026490..1026942) some similarities with...   282   2e-99
AGR156C [4467] [Homologous to ScYER159C (BUR6) - SH] (1042863..1...   159   4e-51
Sklu_1568.1 YER159C, Contig c1568 2406-2789 reverse complement        152   2e-48
Kwal_56.23401                                                         148   5e-47
YER159C (BUR6) [1588] chr5 complement(491525..491953) Alpha subu...   146   5e-46
CAGL0I08635g complement(842539..842958) no similarity, hypotheti...   141   5e-44
Scas_576.1*                                                           127   6e-39
Kwal_26.6856                                                           54   6e-10
ADR391W [2132] [Homologous to ScYOR358W (HAP5) - SH] complement(...    52   7e-09
YOR358W (HAP5) [5135] chr15 (1010157..1010885) Component (with H...    51   4e-08
Sklu_2404.2 YOR358W, Contig c2404 859-1353 reverse complement          49   6e-08
KLLA0A03696g complement(334065..334535) similar to sp|Q02516 Sac...    49   8e-08
CAGL0K09900g 968269..968874 similar to sp|Q02516 Saccharomyces c...    49   1e-07
Scas_663.18                                                            47   8e-07
Sklu_913.1 YJL065C, Contig c913 1211-1756                              43   1e-05
Kwal_0.26                                                              35   0.016
Kwal_27.11599                                                          33   0.044
Kwal_27.10999                                                          33   0.047
KLLA0F01859g 170883..171383 some similarities with sp|P40366 Sac...    33   0.054
Scas_675.15                                                            33   0.062
CAGL0C04411g 426015..426410 highly similar to sp|P04911 Saccharo...    32   0.078
Scas_482.1                                                             32   0.078
CAGL0K11440g complement(1111362..1111757) highly similar to sp|P...    32   0.081
AGR184W [4495] [Homologous to ScYDR225W (HTA1) - SH] complement(...    32   0.087
Sklu_890.1 , Contig c890 480-875 reverse complement                    32   0.093
KLLA0F13332g 1230744..1231136 some similarities with sp|P04911 S...    32   0.094
KLLA0E17413g 1539714..1540106 some similarities with sp|P04911 S...    32   0.094
YDR225W (HTA1) [1061] chr4 (915522..915920) Histone H2A, nearly ...    32   0.095
YBL003C (HTA2) [191] chr2 complement(235359..235757) Histone H2A...    32   0.095
Scas_721.83                                                            32   0.095
Sklu_1763.1 YDR225W, Contig c1763 299-697 reverse complement           32   0.10 
AEL003C [2503] [Homologous to ScYBL003C (HTA2) - SH] (631732..63...    32   0.10 
YBR278W (DPB3) [456] chr2 (760252..760857) DNA polymerase epsilo...    32   0.12 
AEL159W [2347] [Homologous to ScYJL065C - SH; ScYBR278W (DPB3) -...    31   0.31 
Scas_644.7                                                             29   0.62 
Kwal_27.9948                                                           29   1.7  
Sklu_1188.1 YOL012C, Contig c1188 570-974 reverse complement           28   2.7  
Kwal_56.22517                                                          27   3.1  
ACL017C [1032] [Homologous to ScYOL012C (HTZ1) - SH] (330555..33...    27   3.4  

>KLLA0C11935g complement(1026490..1026942) some similarities with
           sp|P40096 Saccharomyces cerevisiae YER159c NCB1
           functional homolog of human NC2alpha singleton,
           hypothetical start
          Length = 150

 Score =  282 bits (721), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 141/148 (95%), Positives = 141/148 (95%)

Query: 1   MSEYDSGVSSDERGSSQAPDVGSTAVSSELGNLRENIASGDGVHDXXXXXXXMTVRSRDA 60
           MSEYDSGVSSDERGSSQAPDVGSTAVSSELGNLRENIASGDGVHD       MTVRSRDA
Sbjct: 1   MSEYDSGVSSDERGSSQAPDVGSTAVSSELGNLRENIASGDGVHDNNNGNNGMTVRSRDA 60

Query: 61  EVFDKIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGS 120
           EVFDKIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGS
Sbjct: 61  EVFDKIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGS 120

Query: 121 KRISADIMKKTILTDEKFDFLREVILPQ 148
           KRISADIMKKTILTDEKFDFLREVILPQ
Sbjct: 121 KRISADIMKKTILTDEKFDFLREVILPQ 148

>AGR156C [4467] [Homologous to ScYER159C (BUR6) - SH]
           (1042863..1043246) [384 bp, 127 aa]
          Length = 127

 Score =  159 bits (402), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 74/86 (86%), Positives = 83/86 (96%)

Query: 63  FDKIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGSKR 122
           FDKIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIA+LVDKSS++A++QGSKR
Sbjct: 17  FDKIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVDKSSQMAKEQGSKR 76

Query: 123 ISADIMKKTILTDEKFDFLREVILPQ 148
           IS DIMKKTI+ DEKFDFLRE++ P+
Sbjct: 77  ISGDIMKKTIMADEKFDFLREIVCPE 102

>Sklu_1568.1 YER159C, Contig c1568 2406-2789 reverse complement
          Length = 127

 Score =  152 bits (384), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 72/86 (83%), Positives = 79/86 (91%)

Query: 61  EVFDKIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGS 120
           +VF KIKTHFPPAK+KKIMQTDEDIGKVSQATPVITGRSLEFFIALLV KSS VAR+ G 
Sbjct: 12  QVFTKIKTHFPPAKVKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVSKSSDVAREMGC 71

Query: 121 KRISADIMKKTILTDEKFDFLREVIL 146
           KRIS D+MKKTI+TDEKFDFLRE++ 
Sbjct: 72  KRISGDVMKKTIMTDEKFDFLREIVC 97

>Kwal_56.23401
          Length = 109

 Score =  148 bits (373), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 68/90 (75%), Positives = 81/90 (90%)

Query: 57  SRDAEVFDKIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVAR 116
           ++ +EVF  IKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIA+LV++S  VA+
Sbjct: 4   NQGSEVFGNIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIAMLVNRSGHVAK 63

Query: 117 DQGSKRISADIMKKTILTDEKFDFLREVIL 146
           + G +RIS ++MKKTI+TDEKFDFLRE+I 
Sbjct: 64  EMGCRRISGEVMKKTIMTDEKFDFLRELIC 93

>YER159C (BUR6) [1588] chr5 complement(491525..491953) Alpha subunit
           of NC2 (Dr1/Drap1) regulator of class II transcription,
           contains a histone fold domain [429 bp, 142 aa]
          Length = 142

 Score =  146 bits (369), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 69/84 (82%), Positives = 78/84 (92%)

Query: 60  AEVFDKIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQG 119
            +VFD+IKTHFPPAK+KKIMQTDEDIGKVSQATPVI GRSLEFFIALLV KS ++AR QG
Sbjct: 43  GDVFDRIKTHFPPAKVKKIMQTDEDIGKVSQATPVIAGRSLEFFIALLVKKSGEMARGQG 102

Query: 120 SKRISADIMKKTILTDEKFDFLRE 143
           +KRI+A+I+KKTIL DEKFDFLRE
Sbjct: 103 TKRITAEILKKTILNDEKFDFLRE 126

>CAGL0I08635g complement(842539..842958) no similarity, hypothetical
           start
          Length = 139

 Score =  141 bits (356), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 66/86 (76%), Positives = 77/86 (89%)

Query: 61  EVFDKIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGS 120
           EVF+KIKTHFPPAK+KKIMQ+DEDIGKVSQATPVITGRSLEFF+ALLV KS  +AR +G 
Sbjct: 41  EVFEKIKTHFPPAKVKKIMQSDEDIGKVSQATPVITGRSLEFFMALLVKKSGDMARQRGM 100

Query: 121 KRISADIMKKTILTDEKFDFLREVIL 146
           KRI+AD+++ TIL DE+FDFLRE I 
Sbjct: 101 KRITADVLRDTILEDERFDFLRESIC 126

>Scas_576.1*
          Length = 90

 Score =  127 bits (318), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 61/83 (73%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 61  EVFDKIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGS 120
           EVFD++KTHFPPAK+K I+Q+ +DIGKV QATPVI GR+LEFFIALLV KS  VAR  G+
Sbjct: 6   EVFDRLKTHFPPAKVK-ILQSYDDIGKVFQATPVIAGRALEFFIALLVKKSGDVARKNGT 64

Query: 121 KRISADIMKKTILTDEKFDFLRE 143
           KRI+AD++K+TILTDEK DFLRE
Sbjct: 65  KRITADVLKQTILTDEKLDFLRE 87

>Kwal_26.6856
          Length = 138

 Score = 54.3 bits (129), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 1/83 (1%)

Query: 64  DKIKTH-FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGSKR 122
           D  K+H  P A+IKK+M+TDED+  +S   P++  ++ E FI  L  ++  +A +   + 
Sbjct: 51  DDFKSHSLPLARIKKVMKTDEDVRMISAEAPILFAKACEIFITELTMRAWCIAEEHKRRT 110

Query: 123 ISADIMKKTILTDEKFDFLREVI 145
           +    + + +L  + FDFL +++
Sbjct: 111 LQKSDIAQALLKSDMFDFLIDIV 133

>ADR391W [2132] [Homologous to ScYOR358W (HAP5) - SH]
           complement(1410823..1411260) [438 bp, 145 aa]
          Length = 145

 Score = 51.6 bits (122), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 47/83 (56%), Gaps = 1/83 (1%)

Query: 64  DKIKTH-FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGSKR 122
           D  K+H  P A+IKK+M+TDED+  +S   P++  ++ E FI  L  ++  +A +   + 
Sbjct: 58  DDFKSHSLPLARIKKVMKTDEDVKMISAEAPILFAKACEIFITELTMRAWCIAEENKRRT 117

Query: 123 ISADIMKKTILTDEKFDFLREVI 145
           +    + + +   + FDFL +++
Sbjct: 118 LQKQDIAQALQKSDMFDFLIDIV 140

>YOR358W (HAP5) [5135] chr15 (1010157..1010885) Component (with
           Hap2p, Hap3p, and Hap4p) of heterotrimeric CCAAT-binding
           factor [729 bp, 242 aa]
          Length = 242

 Score = 50.8 bits (120), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 5/90 (5%)

Query: 64  DKIKTH-FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGSKR 122
           D  K+H  P A+I+K+M+TDED+  +S   P+I  ++ E FI  L  ++  VA     + 
Sbjct: 153 DDFKSHSLPFARIRKVMKTDEDVKMISAEAPIIFAKACEIFITELTMRAWCVAERNKRRT 212

Query: 123 ISADIMKKTILTDEKFDFLREVI----LPQ 148
           +    + + +   + FDFL +V+    LPQ
Sbjct: 213 LQKADIAEALQKSDMFDFLIDVVPRRPLPQ 242

>Sklu_2404.2 YOR358W, Contig c2404 859-1353 reverse complement
          Length = 164

 Score = 49.3 bits (116), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 1/83 (1%)

Query: 64  DKIKTH-FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGSKR 122
           D  ++H  P A+IKK+M+TDED+  +S   P++  ++ E F+  L  ++  VA +   + 
Sbjct: 76  DDFRSHSLPLARIKKVMKTDEDVRMISAEAPILFAKACEIFVTELTMRAWCVAEESKRRT 135

Query: 123 ISADIMKKTILTDEKFDFLREVI 145
           +    + + +   + FDFL +++
Sbjct: 136 LQKADIAEALQKSDMFDFLIDIV 158

>KLLA0A03696g complement(334065..334535) similar to sp|Q02516
           Saccharomyces cerevisiae YOR358w HAP5 CCAAT-binding
           factor subunit singleton, hypothetical start
          Length = 156

 Score = 48.9 bits (115), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 1/83 (1%)

Query: 64  DKIKTH-FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGSKR 122
           D  K+H  P A+IKK+M+TDE++  +S   P++  ++ E FI  L  ++  VA +   + 
Sbjct: 69  DDFKSHSLPLARIKKVMKTDEEVRMISGEAPILFAKACEIFITELTMRAWCVAEENKRRT 128

Query: 123 ISADIMKKTILTDEKFDFLREVI 145
           +    +   +   + FDFL +++
Sbjct: 129 LQKQDIADALQKSDMFDFLIDIV 151

>CAGL0K09900g 968269..968874 similar to sp|Q02516 Saccharomyces
           cerevisiae YOR358w HAP5 CCAAT-binding factor subunit,
           hypothetical start
          Length = 201

 Score = 49.3 bits (116), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 3/88 (3%)

Query: 60  AEVFDKIKTH-FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQ 118
           +E  D  K+H  P A+I+++M+TDE++  +S   P+I  ++ E FI  L  ++  VA   
Sbjct: 103 SEYQDDFKSHSLPFARIRRVMKTDEEVKMISAEAPIIFAKACEVFITELTMRAWCVAEKH 162

Query: 119 GSKRIS-ADIMKKTILTDEKFDFLREVI 145
             + +  ADI +   ++D  FDFL +++
Sbjct: 163 KRRTLQKADIAEALQMSD-MFDFLIDIV 189

>Scas_663.18
          Length = 219

 Score = 47.0 bits (110), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 43/76 (56%)

Query: 70  FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGSKRISADIMK 129
            P A+I+K+M+TDED+  +S   P+I  ++ E FI  L  ++  VA +   + +    + 
Sbjct: 135 LPFARIRKVMKTDEDVRMISAEVPIIFAKACEIFITELTMRAWCVAENNRRRTLQKADIA 194

Query: 130 KTILTDEKFDFLREVI 145
           + +   + +DFL +++
Sbjct: 195 EALKKCDMYDFLIDIV 210

>Sklu_913.1 YJL065C, Contig c913 1211-1756
          Length = 181

 Score = 43.1 bits (100), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 4/83 (4%)

Query: 67  KTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVAR----DQGSKR 122
           + H P +K K+I +TD D    SQA  V T  + E FI   V+++  V++    +  S R
Sbjct: 16  RPHLPVSKCKRIAKTDPDCILTSQAAYVATAFATELFIQNFVEEAMLVSQLEKNNAKSVR 75

Query: 123 ISADIMKKTILTDEKFDFLREVI 145
           ++ D + K +   +KF FL +V+
Sbjct: 76  LTYDNLAKCVSRLDKFIFLGDVV 98

>Kwal_0.26
          Length = 199

 Score = 34.7 bits (78), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 4/93 (4%)

Query: 57  SRDAEVFDKIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKS---SK 113
           S   E   K     P +K+K+I + D D    SQ+       + E F+ +  ++    S+
Sbjct: 4   SNATEAVKKTAPKLPISKVKRIAKADPDYIICSQSATAALAFATELFVQVFSEEGLAKSQ 63

Query: 114 VARDQGSK-RISADIMKKTILTDEKFDFLREVI 145
           + R  GS+  +  D +   + T ++F FL +VI
Sbjct: 64  LDRPAGSRLTLRYDDLASCVATSDRFAFLSDVI 96

>Kwal_27.11599
          Length = 131

 Score = 32.7 bits (73), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 16/72 (22%), Positives = 33/72 (45%)

Query: 70  FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGSKRISADIMK 129
           FP  ++ ++++      +V    PV     LE+  A +++ +   ARD    RI    ++
Sbjct: 26  FPVGRVHRLLRRGNYAQRVGSGAPVYMTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQ 85

Query: 130 KTILTDEKFDFL 141
             I  D++ + L
Sbjct: 86  LAIRNDDELNKL 97

>Kwal_27.10999
          Length = 132

 Score = 32.7 bits (73), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 16/72 (22%), Positives = 33/72 (45%)

Query: 70  FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGSKRISADIMK 129
           FP  ++ ++++      +V    PV     LE+  A +++ +   ARD    RI    ++
Sbjct: 27  FPVGRVHRLLRRGNYAQRVGSGAPVYMTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQ 86

Query: 130 KTILTDEKFDFL 141
             I  D++ + L
Sbjct: 87  LAIRNDDELNKL 98

>KLLA0F01859g 170883..171383 some similarities with sp|P40366
           Saccharomyces cerevisiae YJL065c singleton, hypothetical
           start
          Length = 166

 Score = 32.7 bits (73), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 70  FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVA---RDQGSKRISAD 126
            P +K KKI +TD +    SQA    T  + E FI +L +++  +A   +   + R++ +
Sbjct: 11  IPISKCKKIARTDPEYILTSQAAFAATAFTTELFIQMLAEETCSLAQIHKQTKTLRLNYE 70

Query: 127 IMKKTILTDEKFDFLREVILPQ 148
            +   I   +KF FL +V+ PQ
Sbjct: 71  DLSTAIRNLDKFQFLSDVV-PQ 91

>Scas_675.15
          Length = 305

 Score = 33.1 bits (74), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 11/99 (11%)

Query: 60  AEVFDKIKTHFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFI------ALLVDKSSK 113
           AE      +  P +KIKKI + D +    S A  + T  + E FI      A+++ + +K
Sbjct: 39  AEQIKSKSSRLPLSKIKKIAKMDSEYIITSNAAFMATAFATELFIQSFCEEAVVLGQLNK 98

Query: 114 VARDQ-----GSKRISADIMKKTILTDEKFDFLREVILP 147
             +       GS R+  + M + +   E F FL +V+LP
Sbjct: 99  TGKKTNTAPTGSSRLGYNEMSECVRKKENFQFLEDVLLP 137

>CAGL0C04411g 426015..426410 highly similar to sp|P04911
           Saccharomyces cerevisiae YDR225w HTA1 or sp|P04912
           Saccharomyces cerevisiae YBL003c HTA2, start by
           similarity
          Length = 131

 Score = 32.0 bits (71), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 15/72 (20%), Positives = 33/72 (45%)

Query: 70  FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGSKRISADIMK 129
           FP  ++ ++++      ++    PV     LE+  A +++ +   ARD    RI    ++
Sbjct: 27  FPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKSRIIPRHLQ 86

Query: 130 KTILTDEKFDFL 141
             I  D++ + L
Sbjct: 87  LAIRNDDELNKL 98

>Scas_482.1
          Length = 110

 Score = 31.6 bits (70), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 15/72 (20%), Positives = 33/72 (45%)

Query: 70  FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGSKRISADIMK 129
           FP  ++ ++++      ++    PV     LE+  A +++ +   ARD    RI    ++
Sbjct: 5   FPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQ 64

Query: 130 KTILTDEKFDFL 141
             I  D++ + L
Sbjct: 65  LAIRNDDELNKL 76

>CAGL0K11440g complement(1111362..1111757) highly similar to
           sp|P04911 Saccharomyces cerevisiae YDR225w HTA1 or
           sp|P04912 Saccharomyces cerevisiae YBL003c HTA2, start
           by similarity
          Length = 131

 Score = 32.0 bits (71), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 15/72 (20%), Positives = 33/72 (45%)

Query: 70  FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGSKRISADIMK 129
           FP  ++ ++++      ++    PV     LE+  A +++ +   ARD    RI    ++
Sbjct: 27  FPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKSRIIPRHLQ 86

Query: 130 KTILTDEKFDFL 141
             I  D++ + L
Sbjct: 87  LAIRNDDELNKL 98

>AGR184W [4495] [Homologous to ScYDR225W (HTA1) - SH]
           complement(1095987..1096514) [528 bp, 175 aa]
          Length = 175

 Score = 32.3 bits (72), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 15/72 (20%), Positives = 33/72 (45%)

Query: 70  FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGSKRISADIMK 129
           FP  ++ ++++      ++    PV     LE+  A +++ +   ARD    RI    ++
Sbjct: 70  FPVGRVHRLLRKGNYAQRIGSGAPVYMTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQ 129

Query: 130 KTILTDEKFDFL 141
             I  D++ + L
Sbjct: 130 LAIRNDDELNKL 141

>Sklu_890.1 , Contig c890 480-875 reverse complement
          Length = 131

 Score = 32.0 bits (71), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 15/72 (20%), Positives = 33/72 (45%)

Query: 70  FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGSKRISADIMK 129
           FP  ++ ++++      ++    PV     LE+  A +++ +   ARD    RI    ++
Sbjct: 26  FPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQ 85

Query: 130 KTILTDEKFDFL 141
             I  D++ + L
Sbjct: 86  LAIRNDDELNKL 97

>KLLA0F13332g 1230744..1231136 some similarities with sp|P04911
           Saccharomyces cerevisiae YDR225w HTA1 histone H2A,
           hypothetical start
          Length = 130

 Score = 31.6 bits (70), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 15/72 (20%), Positives = 33/72 (45%)

Query: 70  FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGSKRISADIMK 129
           FP  ++ ++++      ++    PV     LE+  A +++ +   ARD    RI    ++
Sbjct: 26  FPVGRVHRLLRKGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQ 85

Query: 130 KTILTDEKFDFL 141
             I  D++ + L
Sbjct: 86  LAIRNDDELNKL 97

>KLLA0E17413g 1539714..1540106 some similarities with sp|P04911
           Saccharomyces cerevisiae YDR225w HTA1 histone H2A,
           hypothetical start
          Length = 130

 Score = 31.6 bits (70), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 15/72 (20%), Positives = 33/72 (45%)

Query: 70  FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGSKRISADIMK 129
           FP  ++ ++++      ++    PV     LE+  A +++ +   ARD    RI    ++
Sbjct: 26  FPVGRVHRLLRKGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQ 85

Query: 130 KTILTDEKFDFL 141
             I  D++ + L
Sbjct: 86  LAIRNDDELNKL 97

>YDR225W (HTA1) [1061] chr4 (915522..915920) Histone H2A, nearly
           identical to Hta2p [399 bp, 132 aa]
          Length = 132

 Score = 31.6 bits (70), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 15/72 (20%), Positives = 33/72 (45%)

Query: 70  FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGSKRISADIMK 129
           FP  ++ ++++      ++    PV     LE+  A +++ +   ARD    RI    ++
Sbjct: 27  FPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQ 86

Query: 130 KTILTDEKFDFL 141
             I  D++ + L
Sbjct: 87  LAIRNDDELNKL 98

>YBL003C (HTA2) [191] chr2 complement(235359..235757) Histone H2A,
           nearly identical to Hta1p [399 bp, 132 aa]
          Length = 132

 Score = 31.6 bits (70), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 15/72 (20%), Positives = 33/72 (45%)

Query: 70  FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGSKRISADIMK 129
           FP  ++ ++++      ++    PV     LE+  A +++ +   ARD    RI    ++
Sbjct: 27  FPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQ 86

Query: 130 KTILTDEKFDFL 141
             I  D++ + L
Sbjct: 87  LAIRNDDELNKL 98

>Scas_721.83
          Length = 132

 Score = 31.6 bits (70), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 15/72 (20%), Positives = 33/72 (45%)

Query: 70  FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGSKRISADIMK 129
           FP  ++ ++++      ++    PV     LE+  A +++ +   ARD    RI    ++
Sbjct: 27  FPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQ 86

Query: 130 KTILTDEKFDFL 141
             I  D++ + L
Sbjct: 87  LAIRNDDELNKL 98

>Sklu_1763.1 YDR225W, Contig c1763 299-697 reverse complement
          Length = 132

 Score = 31.6 bits (70), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 15/72 (20%), Positives = 33/72 (45%)

Query: 70  FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGSKRISADIMK 129
           FP  ++ ++++      ++    PV     LE+  A +++ +   ARD    RI    ++
Sbjct: 27  FPVGRVHRLLRKGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQ 86

Query: 130 KTILTDEKFDFL 141
             I  D++ + L
Sbjct: 87  LAIRNDDELNKL 98

>AEL003C [2503] [Homologous to ScYBL003C (HTA2) - SH]
           (631732..632127) [396 bp, 131 aa]
          Length = 131

 Score = 31.6 bits (70), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 15/72 (20%), Positives = 33/72 (45%)

Query: 70  FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGSKRISADIMK 129
           FP  ++ ++++      ++    PV     LE+  A +++ +   ARD    RI    ++
Sbjct: 26  FPVGRVHRLLRKGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQ 85

Query: 130 KTILTDEKFDFL 141
             I  D++ + L
Sbjct: 86  LAIRNDDELNKL 97

>YBR278W (DPB3) [456] chr2 (760252..760857) DNA polymerase epsilon
           third subunit [606 bp, 201 aa]
          Length = 201

 Score = 32.0 bits (71), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 4/80 (5%)

Query: 70  FPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFIALLVDKSSKVA----RDQGSKRISA 125
           FP +K+KKI + D +    S      T  + E F+  LV++S  +A    + + S R+S 
Sbjct: 12  FPISKVKKIAKCDPEYVITSNVAISATAFAAELFVQNLVEESLVLAQLNSKGKTSLRLSL 71

Query: 126 DIMKKTILTDEKFDFLREVI 145
           + +++ +   + F FL + I
Sbjct: 72  NSIEECVEKRDNFRFLEDAI 91

>AEL159W [2347] [Homologous to ScYJL065C - SH; ScYBR278W (DPB3) -
           SH] complement(333197..333748) [552 bp, 183 aa]
          Length = 183

 Score = 30.8 bits (68), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 6/83 (7%)

Query: 69  HFPPAKIKKIMQTDEDIGKVSQATPVITGRSLEFFI-ALLVDKSSKVARD-----QGSKR 122
             P +K K+I +TD D    +QA  + T  + E F+ A+  D  ++   D       + R
Sbjct: 12  RLPISKCKRIAKTDPDYIMTTQAAYIATAFATELFVQAISEDAMAQAQLDGRRAGGRAAR 71

Query: 123 ISADIMKKTILTDEKFDFLREVI 145
           ++ + + +++  +E++ FL +VI
Sbjct: 72  LTYNDLARSVAREERYAFLADVI 94

>Scas_644.7
          Length = 131

 Score = 29.3 bits (64), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 5/80 (6%)

Query: 65  KIKTHFPPAKIKKIMQTDEDIGKV---SQATPVITGRSLEFFIALLVDKSSKVARDQGSK 121
           K    FP  +IK+ ++ +   GKV   S+A   +T   LE+  A +++ +   A+D   K
Sbjct: 27  KAGLQFPVGRIKRYLKRNAS-GKVRVGSKAAIYLTA-VLEYLTAEVLELAGNAAKDLKVK 84

Query: 122 RISADIMKKTILTDEKFDFL 141
           RI+   ++  I  D++ D L
Sbjct: 85  RITPRHLQLAIRGDDELDSL 104

>Kwal_27.9948
          Length = 2469

 Score = 28.9 bits (63), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 10/96 (10%)

Query: 55   VRSRDAEVFDKIKTHFPPAKIK-KIMQTDEDIGKVSQAT-PVITGRSLEFFIALL-VDKS 111
            +R   AE+F+ IK  FP  K++  I+   E   K  +    +    +L  F+ +L  DKS
Sbjct: 989  IRPFVAEIFEVIKEFFPLVKLQITIISVIESFSKALKGEFKLFLPSTLTLFLDVLEKDKS 1048

Query: 112  SKVARDQGSKRISADIMKKTILTDEKFDFLREVILP 147
            +K       K +S  I+K  ++ D   +    +I+P
Sbjct: 1049 NK-------KIVSVRILKSLVVFDANLEEFSHLIIP 1077

>Sklu_1188.1 YOL012C, Contig c1188 570-974 reverse complement
          Length = 134

 Score = 27.7 bits (60), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 70  FPPAKIKKIMQTDEDIGKV---SQATPVITGRSLEFFIALLVDKSSKVARDQGSKRISAD 126
           FP  +IK+ ++ +   GK    S+A   +T   LE+  A +++ +   A+D   KRI+  
Sbjct: 33  FPVGRIKRYLKKNAA-GKTRVGSKAAIYLTA-VLEYLTAEVLELAGNAAKDLKVKRITPR 90

Query: 127 IMKKTILTDEKFDFL 141
            ++  I  D++ D L
Sbjct: 91  HLQLAIRGDDELDTL 105

>Kwal_56.22517
          Length = 134

 Score = 27.3 bits (59), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 1/73 (1%)

Query: 70  FPPAKIKKIMQTDE-DIGKVSQATPVITGRSLEFFIALLVDKSSKVARDQGSKRISADIM 128
           FP  +IK+ ++ +     +V   + +     LE+  A +++ +   A+D   KRI+   +
Sbjct: 33  FPVGRIKRYLKRNAAGRTRVGSKSAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHL 92

Query: 129 KKTILTDEKFDFL 141
           +  I  D++ D L
Sbjct: 93  QLAIRGDDELDTL 105

>ACL017C [1032] [Homologous to ScYOL012C (HTZ1) - SH]
           (330555..330956) [402 bp, 133 aa]
          Length = 133

 Score = 27.3 bits (59), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 70  FPPAKIKKIMQTDEDIGKV---SQATPVITGRSLEFFIALLVDKSSKVARDQGSKRISAD 126
           FP  +IK+ ++ +   GK    S+A   +T   LE+  A +++ +   A+D   KRI+  
Sbjct: 33  FPVGRIKRYLKKNAA-GKTRVGSKAAIYLTA-VLEYLTAEVLELAGNAAKDLKVKRITPR 90

Query: 127 IMKKTILTDEKFDFL 141
            ++  I  D++ D L
Sbjct: 91  HLQLAIRGDDELDSL 105

  Database: blastdb
    Posted date:  Apr 3, 2006  3:33 PM
  Number of letters in database: 16,596,109
  Number of sequences in database:  34,618
  
Lambda     K      H
   0.313    0.130    0.347 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 34618
Number of Hits to DB: 4,044,029
Number of extensions: 134262
Number of successful extensions: 352
Number of sequences better than 10.0: 45
Number of HSP's gapped: 350
Number of HSP's successfully gapped: 45
Length of query: 148
Length of database: 16,596,109
Length adjustment: 92
Effective length of query: 56
Effective length of database: 13,411,253
Effective search space: 751030168
Effective search space used: 751030168
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)