Hit NameLength (aa)HSP LengthHSP ScoreHSP Significance
ACL017C1331135706e-77
KLLA0C05918g1321115438e-73
Sklu_1188.11341115385e-72
Kwal_56.225171341095221e-69
Scas_644.71311115202e-69
YOL012C (HTZ1)1341045046e-67
KLLA0F13332g1301103251e-39
KLLA0E17413g1301103251e-39
YBL003C (HTA2)1321103223e-39
AEL003C1311103223e-39
Sklu_890.11311063214e-39
Kwal_27.115991311103214e-39
Sklu_1763.11321053206e-39
CAGL0K11440g1311103207e-39
YDR225W (HTA1)1321093172e-38
Scas_721.831321093172e-38
Kwal_27.109991321093172e-38
AGR184W1751103202e-38
CAGL0C04411g1311093153e-38
Scas_482.11101022933e-35
Kwal_56.2340110976710.058
CAGL0I08635g13983670.26
Scas_576.1*9078601.5
YER159C (BUR6)14279611.5
AGR156C12788611.6
CAGL0C01243g38337611.9
Sklu_1568.112776602.0
KLLA0C11935g15075584.5
AFR129W49855586.5
BLASTP 2.2.26 [Sep-21-2011]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= ACL017C
         (131 letters)

Database: blastdb 
           34,618 sequences; 16,596,109 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ACL017C [1032] [Homologous to ScYOL012C (HTZ1) - SH] (330555..33...   224   6e-77
KLLA0C05918g complement(522995..523393) similar to sp|Q12692 Sac...   213   8e-73
Sklu_1188.1 YOL012C, Contig c1188 570-974 reverse complement          211   5e-72
Kwal_56.22517                                                         205   1e-69
Scas_644.7                                                            204   2e-69
YOL012C (HTZ1) [4804] chr15 complement(303579..303983) Histone-r...   198   6e-67
KLLA0F13332g 1230744..1231136 some similarities with sp|P04911 S...   129   1e-39
KLLA0E17413g 1539714..1540106 some similarities with sp|P04911 S...   129   1e-39
YBL003C (HTA2) [191] chr2 complement(235359..235757) Histone H2A...   128   3e-39
AEL003C [2503] [Homologous to ScYBL003C (HTA2) - SH] (631732..63...   128   3e-39
Sklu_890.1 , Contig c890 480-875 reverse complement                   128   4e-39
Kwal_27.11599                                                         128   4e-39
Sklu_1763.1 YDR225W, Contig c1763 299-697 reverse complement          127   6e-39
CAGL0K11440g complement(1111362..1111757) highly similar to sp|P...   127   7e-39
YDR225W (HTA1) [1061] chr4 (915522..915920) Histone H2A, nearly ...   126   2e-38
Scas_721.83                                                           126   2e-38
Kwal_27.10999                                                         126   2e-38
AGR184W [4495] [Homologous to ScYDR225W (HTA1) - SH] complement(...   127   2e-38
CAGL0C04411g 426015..426410 highly similar to sp|P04911 Saccharo...   125   3e-38
Scas_482.1                                                            117   3e-35
Kwal_56.23401                                                          32   0.058
CAGL0I08635g complement(842539..842958) no similarity, hypotheti...    30   0.26 
Scas_576.1*                                                            28   1.5  
YER159C (BUR6) [1588] chr5 complement(491525..491953) Alpha subu...    28   1.5  
AGR156C [4467] [Homologous to ScYER159C (BUR6) - SH] (1042863..1...    28   1.6  
CAGL0C01243g 128629..129780 highly similar to sp|P07172 Saccharo...    28   1.9  
Sklu_1568.1 YER159C, Contig c1568 2406-2789 reverse complement         28   2.0  
KLLA0C11935g complement(1026490..1026942) some similarities with...    27   4.5  
AFR129W [3321] [Homologous to ScYHR183W (GND1) - SH; ScYGR256W (...    27   6.5  

>ACL017C [1032] [Homologous to ScYOL012C (HTZ1) - SH]
           (330555..330956) [402 bp, 133 aa]
          Length = 133

 Score =  224 bits (570), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 113/113 (100%), Positives = 113/113 (100%)

Query: 19  PLGSQSHSARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNA 78
           PLGSQSHSARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNA
Sbjct: 19  PLGSQSHSARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNA 78

Query: 79  AKDLKVKRITPRHLQLAIRGDDELDSLIRATIASGGVLPHINKALLLKVEKKT 131
           AKDLKVKRITPRHLQLAIRGDDELDSLIRATIASGGVLPHINKALLLKVEKKT
Sbjct: 79  AKDLKVKRITPRHLQLAIRGDDELDSLIRATIASGGVLPHINKALLLKVEKKT 131

>KLLA0C05918g complement(522995..523393) similar to sp|Q12692
           Saccharomyces cerevisiae YOL012c HTZ1 evolutionarily
           conserved member of the histone H2A F/Z family of
           histone variants, start by similarity
          Length = 132

 Score =  213 bits (543), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 107/111 (96%), Positives = 110/111 (99%)

Query: 20  LGSQSHSARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAA 79
           L SQSHSARAGLQFPVGR+KRYLK+NAAG+TRVGSKAAIYLTAVLEYLTAEVLELAGNAA
Sbjct: 20  LKSQSHSARAGLQFPVGRVKRYLKRNAAGRTRVGSKAAIYLTAVLEYLTAEVLELAGNAA 79

Query: 80  KDLKVKRITPRHLQLAIRGDDELDSLIRATIASGGVLPHINKALLLKVEKK 130
           KDLKVKRITPRHLQLAIRGDDELDSLIRATIASGGVLPHINKALLLKVEKK
Sbjct: 80  KDLKVKRITPRHLQLAIRGDDELDSLIRATIASGGVLPHINKALLLKVEKK 130

>Sklu_1188.1 YOL012C, Contig c1188 570-974 reverse complement
          Length = 134

 Score =  211 bits (538), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 106/111 (95%), Positives = 110/111 (99%)

Query: 20  LGSQSHSARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAA 79
           L SQSHSARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAA
Sbjct: 20  LRSQSHSARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAA 79

Query: 80  KDLKVKRITPRHLQLAIRGDDELDSLIRATIASGGVLPHINKALLLKVEKK 130
           KDLKVKRITPRHLQLAIRGDDELD+LIRATI++GGVLPHINKALLLKVE+K
Sbjct: 80  KDLKVKRITPRHLQLAIRGDDELDTLIRATISAGGVLPHINKALLLKVERK 130

>Kwal_56.22517
          Length = 134

 Score =  205 bits (522), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 100/109 (91%), Positives = 108/109 (99%)

Query: 22  SQSHSARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKD 81
           + +HSARAGLQFPVGRIKRYLK+NAAG+TRVGSK+AIYLTAVLEYLTAEVLELAGNAAKD
Sbjct: 22  ATTHSARAGLQFPVGRIKRYLKRNAAGRTRVGSKSAIYLTAVLEYLTAEVLELAGNAAKD 81

Query: 82  LKVKRITPRHLQLAIRGDDELDSLIRATIASGGVLPHINKALLLKVEKK 130
           LKVKRITPRHLQLAIRGDDELD+L+RATIASGGVLPHINKALLLKVE+K
Sbjct: 82  LKVKRITPRHLQLAIRGDDELDTLVRATIASGGVLPHINKALLLKVERK 130

>Scas_644.7
          Length = 131

 Score =  204 bits (520), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 103/111 (92%), Positives = 108/111 (97%)

Query: 20  LGSQSHSARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAA 79
           L +QS SA+AGLQFPVGRIKRYLK+NA+GK RVGSKAAIYLTAVLEYLTAEVLELAGNAA
Sbjct: 19  LRAQSSSAKAGLQFPVGRIKRYLKRNASGKVRVGSKAAIYLTAVLEYLTAEVLELAGNAA 78

Query: 80  KDLKVKRITPRHLQLAIRGDDELDSLIRATIASGGVLPHINKALLLKVEKK 130
           KDLKVKRITPRHLQLAIRGDDELDSLIRATIASGGVLPHINKALLLKVE+K
Sbjct: 79  KDLKVKRITPRHLQLAIRGDDELDSLIRATIASGGVLPHINKALLLKVEQK 129

>YOL012C (HTZ1) [4804] chr15 complement(303579..303983)
           Histone-related protein, involved in silencing, required
           for GAL gene induction [405 bp, 134 aa]
          Length = 134

 Score =  198 bits (504), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 100/104 (96%), Positives = 103/104 (99%)

Query: 27  ARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKR 86
           ARAGLQFPVGRIKRYLK++A G+TRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKR
Sbjct: 27  ARAGLQFPVGRIKRYLKRHATGRTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKR 86

Query: 87  ITPRHLQLAIRGDDELDSLIRATIASGGVLPHINKALLLKVEKK 130
           ITPRHLQLAIRGDDELDSLIRATIASGGVLPHINKALLLKVEKK
Sbjct: 87  ITPRHLQLAIRGDDELDSLIRATIASGGVLPHINKALLLKVEKK 130

>KLLA0F13332g 1230744..1231136 some similarities with sp|P04911
           Saccharomyces cerevisiae YDR225w HTA1 histone H2A,
           hypothetical start
          Length = 130

 Score =  129 bits (325), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 70/110 (63%), Positives = 83/110 (75%), Gaps = 2/110 (1%)

Query: 22  SQSHSARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKD 81
           SQS SA+AGL FPVGR+ R L+K    + R+GS A +YLTAVLEYL AE+LELAGNAA+D
Sbjct: 15  SQSRSAKAGLTFPVGRVHRLLRKGNYAQ-RIGSGAPVYLTAVLEYLAAEILELAGNAARD 73

Query: 82  LKVKRITPRHLQLAIRGDDELDSLI-RATIASGGVLPHINKALLLKVEKK 130
            K  RI PRHLQLAIR DDEL+ L+   TIA GGVLP+I++ LL K   K
Sbjct: 74  NKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSSK 123

>KLLA0E17413g 1539714..1540106 some similarities with sp|P04911
           Saccharomyces cerevisiae YDR225w HTA1 histone H2A,
           hypothetical start
          Length = 130

 Score =  129 bits (325), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 70/110 (63%), Positives = 83/110 (75%), Gaps = 2/110 (1%)

Query: 22  SQSHSARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKD 81
           SQS SA+AGL FPVGR+ R L+K    + R+GS A +YLTAVLEYL AE+LELAGNAA+D
Sbjct: 15  SQSRSAKAGLTFPVGRVHRLLRKGNYAQ-RIGSGAPVYLTAVLEYLAAEILELAGNAARD 73

Query: 82  LKVKRITPRHLQLAIRGDDELDSLI-RATIASGGVLPHINKALLLKVEKK 130
            K  RI PRHLQLAIR DDEL+ L+   TIA GGVLP+I++ LL K   K
Sbjct: 74  NKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSSK 123

>YBL003C (HTA2) [191] chr2 complement(235359..235757) Histone H2A,
           nearly identical to Hta1p [399 bp, 132 aa]
          Length = 132

 Score =  128 bits (322), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 69/110 (62%), Positives = 83/110 (75%), Gaps = 2/110 (1%)

Query: 23  QSHSARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDL 82
           QS SA+AGL FPVGR+ R L++    + R+GS A +YLTAVLEYL AE+LELAGNAA+D 
Sbjct: 17  QSRSAKAGLTFPVGRVHRLLRRGNYAQ-RIGSGAPVYLTAVLEYLAAEILELAGNAARDN 75

Query: 83  KVKRITPRHLQLAIRGDDELDSLI-RATIASGGVLPHINKALLLKVEKKT 131
           K  RI PRHLQLAIR DDEL+ L+   TIA GGVLP+I++ LL K   KT
Sbjct: 76  KKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSAKT 125

>AEL003C [2503] [Homologous to ScYBL003C (HTA2) - SH]
           (631732..632127) [396 bp, 131 aa]
          Length = 131

 Score =  128 bits (322), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 70/110 (63%), Positives = 82/110 (74%), Gaps = 2/110 (1%)

Query: 22  SQSHSARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKD 81
           SQS SA+AGL FPVGR+ R L+K    + R+GS A +YLTAVLEYL AE+LELAGNAA+D
Sbjct: 15  SQSRSAKAGLTFPVGRVHRLLRKGNYAQ-RIGSGAPVYLTAVLEYLAAEILELAGNAARD 73

Query: 82  LKVKRITPRHLQLAIRGDDELDSLI-RATIASGGVLPHINKALLLKVEKK 130
            K  RI PRHLQLAIR DDEL+ L+   TIA GGVLP+I+  LL K   K
Sbjct: 74  NKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHANLLPKKSAK 123

>Sklu_890.1 , Contig c890 480-875 reverse complement
          Length = 131

 Score =  128 bits (321), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 2/106 (1%)

Query: 22  SQSHSARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKD 81
           SQS SA+AGL FPVGR+ R L++    + R+GS A +YLTAVLEYL AE+LELAGNAA+D
Sbjct: 15  SQSRSAKAGLTFPVGRVHRLLRRGNYAQ-RIGSGAPVYLTAVLEYLAAEILELAGNAARD 73

Query: 82  LKVKRITPRHLQLAIRGDDELDSLI-RATIASGGVLPHINKALLLK 126
            K  RI PRHLQLAIR DDEL+ L+   TIA GGVLP+I++ LL K
Sbjct: 74  NKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPK 119

>Kwal_27.11599
          Length = 131

 Score =  128 bits (321), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 69/110 (62%), Positives = 83/110 (75%), Gaps = 2/110 (1%)

Query: 22  SQSHSARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKD 81
           SQS SA+AGL FPVGR+ R L++    + RVGS A +Y+TAVLEYL AE+LELAGNAA+D
Sbjct: 15  SQSRSAKAGLTFPVGRVHRLLRRGNYAQ-RVGSGAPVYMTAVLEYLAAEILELAGNAARD 73

Query: 82  LKVKRITPRHLQLAIRGDDELDSLI-RATIASGGVLPHINKALLLKVEKK 130
            K  RI PRHLQLAIR DDEL+ L+   TIA GGVLP+I++ LL K   K
Sbjct: 74  NKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSGK 123

>Sklu_1763.1 YDR225W, Contig c1763 299-697 reverse complement
          Length = 132

 Score =  127 bits (320), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 68/105 (64%), Positives = 81/105 (77%), Gaps = 2/105 (1%)

Query: 23  QSHSARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDL 82
           QS SA+AGL FPVGR+ R L+K    + R+GS A +YLTAVLEYL AE+LELAGNAA+D 
Sbjct: 17  QSRSAKAGLTFPVGRVHRLLRKGNYAQ-RIGSGAPVYLTAVLEYLAAEILELAGNAARDN 75

Query: 83  KVKRITPRHLQLAIRGDDELDSLI-RATIASGGVLPHINKALLLK 126
           K  RI PRHLQLAIR DDEL+ L+   TIA GGVLP+I++ LL K
Sbjct: 76  KKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPK 120

>CAGL0K11440g complement(1111362..1111757) highly similar to
           sp|P04911 Saccharomyces cerevisiae YDR225w HTA1 or
           sp|P04912 Saccharomyces cerevisiae YBL003c HTA2, start
           by similarity
          Length = 131

 Score =  127 bits (320), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 68/110 (61%), Positives = 83/110 (75%), Gaps = 2/110 (1%)

Query: 22  SQSHSARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKD 81
           SQ+ SA+AGL FPVGR+ R L++    + R+GS A +YLTAVLEYL AE+LELAGNAA+D
Sbjct: 16  SQTRSAKAGLTFPVGRVHRLLRRGNYAQ-RIGSGAPVYLTAVLEYLAAEILELAGNAARD 74

Query: 82  LKVKRITPRHLQLAIRGDDELDSLI-RATIASGGVLPHINKALLLKVEKK 130
            K  RI PRHLQLAIR DDEL+ L+   TIA GGVLP+I++ LL K   K
Sbjct: 75  NKKSRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSAK 124

>YDR225W (HTA1) [1061] chr4 (915522..915920) Histone H2A, nearly
           identical to Hta2p [399 bp, 132 aa]
          Length = 132

 Score =  126 bits (317), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 68/109 (62%), Positives = 82/109 (75%), Gaps = 2/109 (1%)

Query: 23  QSHSARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDL 82
           QS SA+AGL FPVGR+ R L++    + R+GS A +YLTAVLEYL AE+LELAGNAA+D 
Sbjct: 17  QSRSAKAGLTFPVGRVHRLLRRGNYAQ-RIGSGAPVYLTAVLEYLAAEILELAGNAARDN 75

Query: 83  KVKRITPRHLQLAIRGDDELDSLI-RATIASGGVLPHINKALLLKVEKK 130
           K  RI PRHLQLAIR DDEL+ L+   TIA GGVLP+I++ LL K   K
Sbjct: 76  KKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSAK 124

>Scas_721.83
          Length = 132

 Score =  126 bits (317), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 68/109 (62%), Positives = 82/109 (75%), Gaps = 2/109 (1%)

Query: 23  QSHSARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDL 82
           QS SA+AGL FPVGR+ R L++    + R+GS A +YLTAVLEYL AE+LELAGNAA+D 
Sbjct: 17  QSRSAKAGLTFPVGRVHRLLRRGNYAQ-RIGSGAPVYLTAVLEYLAAEILELAGNAARDN 75

Query: 83  KVKRITPRHLQLAIRGDDELDSLI-RATIASGGVLPHINKALLLKVEKK 130
           K  RI PRHLQLAIR DDEL+ L+   TIA GGVLP+I++ LL K   K
Sbjct: 76  KKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSAK 124

>Kwal_27.10999
          Length = 132

 Score =  126 bits (317), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 68/109 (62%), Positives = 82/109 (75%), Gaps = 2/109 (1%)

Query: 23  QSHSARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDL 82
           QS SA+AGL FPVGR+ R L++    + RVGS A +Y+TAVLEYL AE+LELAGNAA+D 
Sbjct: 17  QSRSAKAGLTFPVGRVHRLLRRGNYAQ-RVGSGAPVYMTAVLEYLAAEILELAGNAARDN 75

Query: 83  KVKRITPRHLQLAIRGDDELDSLI-RATIASGGVLPHINKALLLKVEKK 130
           K  RI PRHLQLAIR DDEL+ L+   TIA GGVLP+I++ LL K   K
Sbjct: 76  KKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSAK 124

>AGR184W [4495] [Homologous to ScYDR225W (HTA1) - SH]
           complement(1095987..1096514) [528 bp, 175 aa]
          Length = 175

 Score =  127 bits (320), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 69/110 (62%), Positives = 82/110 (74%), Gaps = 2/110 (1%)

Query: 22  SQSHSARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKD 81
           SQS SA+AGL FPVGR+ R L+K    + R+GS A +Y+TAVLEYL AE+LELAGNAA+D
Sbjct: 59  SQSRSAKAGLTFPVGRVHRLLRKGNYAQ-RIGSGAPVYMTAVLEYLAAEILELAGNAARD 117

Query: 82  LKVKRITPRHLQLAIRGDDELDSLI-RATIASGGVLPHINKALLLKVEKK 130
            K  RI PRHLQLAIR DDEL+ L+   TIA GGVLP+I+  LL K   K
Sbjct: 118 NKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHANLLPKKSAK 167

>CAGL0C04411g 426015..426410 highly similar to sp|P04911
           Saccharomyces cerevisiae YDR225w HTA1 or sp|P04912
           Saccharomyces cerevisiae YBL003c HTA2, start by
           similarity
          Length = 131

 Score =  125 bits (315), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 67/109 (61%), Positives = 82/109 (75%), Gaps = 2/109 (1%)

Query: 23  QSHSARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDL 82
           Q+ SA+AGL FPVGR+ R L++    + R+GS A +YLTAVLEYL AE+LELAGNAA+D 
Sbjct: 17  QTRSAKAGLTFPVGRVHRLLRRGNYAQ-RIGSGAPVYLTAVLEYLAAEILELAGNAARDN 75

Query: 83  KVKRITPRHLQLAIRGDDELDSLI-RATIASGGVLPHINKALLLKVEKK 130
           K  RI PRHLQLAIR DDEL+ L+   TIA GGVLP+I++ LL K   K
Sbjct: 76  KKSRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSAK 124

>Scas_482.1
          Length = 110

 Score =  117 bits (293), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 63/102 (61%), Positives = 76/102 (74%), Gaps = 2/102 (1%)

Query: 30  GLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITP 89
           GL FPVGR+ R L++    + R+GS A +YLTAVLEYL AE+LELAGNAA+D K  RI P
Sbjct: 2   GLTFPVGRVHRLLRRGNYAQ-RIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIP 60

Query: 90  RHLQLAIRGDDELDSLI-RATIASGGVLPHINKALLLKVEKK 130
           RHLQLAIR DDEL+ L+   TIA GGVLP+I++ LL K   K
Sbjct: 61  RHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSAK 102

>Kwal_56.23401
          Length = 109

 Score = 32.0 bits (71), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 5/76 (6%)

Query: 32  QFPVGRIKRYLKKNAA-GKTRVGSKAAIYLTA-VLEYLTAEVLELAGNAAKDLKVKRITP 89
            FP  +IK+ ++ +   GK    S+A   +T   LE+  A ++  +G+ AK++  +RI+ 
Sbjct: 16  HFPPAKIKKIMQTDEDIGKV---SQATPVITGRSLEFFIAMLVNRSGHVAKEMGCRRISG 72

Query: 90  RHLQLAIRGDDELDSL 105
             ++  I  D++ D L
Sbjct: 73  EVMKKTIMTDEKFDFL 88

>CAGL0I08635g complement(842539..842958) no similarity, hypothetical
           start
          Length = 139

 Score = 30.4 bits (67), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 6/83 (7%)

Query: 33  FPVGRIKRYLKKNAA-GKTRVGSKAAIYLTA-VLEYLTAEVLELAGNAAKDLKVKRITPR 90
           FP  ++K+ ++ +   GK    S+A   +T   LE+  A +++ +G+ A+   +KRIT  
Sbjct: 50  FPPAKVKKIMQSDEDIGKV---SQATPVITGRSLEFFMALLVKKSGDMARQRGMKRITAD 106

Query: 91  HLQLAIRGDDELDSLIRATIASG 113
            L+  I  D+  D  +R +I +G
Sbjct: 107 VLRDTILEDERFD-FLRESICAG 128

>Scas_576.1*
          Length = 90

 Score = 27.7 bits (60), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 2/78 (2%)

Query: 28  RAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRI 87
           R    FP  ++K     +  GK  V     +     LE+  A +++ +G+ A+    KRI
Sbjct: 10  RLKTHFPPAKVKILQSYDDIGK--VFQATPVIAGRALEFFIALLVKKSGDVARKNGTKRI 67

Query: 88  TPRHLQLAIRGDDELDSL 105
           T   L+  I  D++LD L
Sbjct: 68  TADVLKQTILTDEKLDFL 85

>YER159C (BUR6) [1588] chr5 complement(491525..491953) Alpha subunit
           of NC2 (Dr1/Drap1) regulator of class II transcription,
           contains a histone fold domain [429 bp, 142 aa]
          Length = 142

 Score = 28.1 bits (61), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%)

Query: 28  RAGLQFPVGRIKRYLKKNAA-GKTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKR 86
           R    FP  ++K+ ++ +   GK  V     +     LE+  A +++ +G  A+    KR
Sbjct: 48  RIKTHFPPAKVKKIMQTDEDIGK--VSQATPVIAGRSLEFFIALLVKKSGEMARGQGTKR 105

Query: 87  ITPRHLQLAIRGDDELDSL 105
           IT   L+  I  D++ D L
Sbjct: 106 ITAEILKKTILNDEKFDFL 124

>AGR156C [4467] [Homologous to ScYER159C (BUR6) - SH]
           (1042863..1043246) [384 bp, 127 aa]
          Length = 127

 Score = 28.1 bits (61), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 5/88 (5%)

Query: 20  LGSQSHSARAGLQFPVGRIKRYLKKNAA-GKTRVGSKAAIYLTA-VLEYLTAEVLELAGN 77
            G  S   +    FP  +IK+ ++ +   GK    S+A   +T   LE+  A +++ +  
Sbjct: 11  CGGNSPFDKIKTHFPPAKIKKIMQTDEDIGKV---SQATPVITGRSLEFFIAMLVDKSSQ 67

Query: 78  AAKDLKVKRITPRHLQLAIRGDDELDSL 105
            AK+   KRI+   ++  I  D++ D L
Sbjct: 68  MAKEQGSKRISGDIMKKTIMADEKFDFL 95

>CAGL0C01243g 128629..129780 highly similar to sp|P07172
           Saccharomyces cerevisiae YIL116w HIS5, start by
           similarity
          Length = 383

 Score = 28.1 bits (61), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 12/37 (32%), Positives = 22/37 (59%)

Query: 77  NAAKDLKVKRITPRHLQLAIRGDDELDSLIRATIASG 113
           ++ KDL +  +T  +L L +  D+ +D++IRA    G
Sbjct: 74  SSFKDLSLPPLTEDNLCLGVGSDESIDAVIRACCVPG 110

>Sklu_1568.1 YER159C, Contig c1568 2406-2789 reverse complement
          Length = 127

 Score = 27.7 bits (60), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 5/76 (6%)

Query: 32  QFPVGRIKRYLKKNA-AGKTRVGSKAAIYLTA-VLEYLTAEVLELAGNAAKDLKVKRITP 89
            FP  ++K+ ++ +   GK    S+A   +T   LE+  A ++  + + A+++  KRI+ 
Sbjct: 20  HFPPAKVKKIMQTDEDIGKV---SQATPVITGRSLEFFIALLVSKSSDVAREMGCKRISG 76

Query: 90  RHLQLAIRGDDELDSL 105
             ++  I  D++ D L
Sbjct: 77  DVMKKTIMTDEKFDFL 92

>KLLA0C11935g complement(1026490..1026942) some similarities with
           sp|P40096 Saccharomyces cerevisiae YER159c NCB1
           functional homolog of human NC2alpha singleton,
           hypothetical start
          Length = 150

 Score = 26.9 bits (58), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 33  FPVGRIKRYLKKNAA-GKTRVGSKAAIYLTA-VLEYLTAEVLELAGNAAKDLKVKRITPR 90
           FP  +IK+ ++ +   GK    S+A   +T   LE+  A +++ +   A+D   KRI+  
Sbjct: 70  FPPAKIKKIMQTDEDIGKV---SQATPVITGRSLEFFIALLVDKSSKVARDQGSKRISAD 126

Query: 91  HLQLAIRGDDELDSL 105
            ++  I  D++ D L
Sbjct: 127 IMKKTILTDEKFDFL 141

>AFR129W [3321] [Homologous to ScYHR183W (GND1) - SH; ScYGR256W
          (GND2) - SH] complement(669131..670627) [1497 bp, 498
          aa]
          Length = 498

 Score = 26.9 bits (58), Expect = 6.5,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 29/55 (52%)

Query: 35 VGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITP 89
          V ++ R+L+  A GK+ +G+     L A L+     +L +   +A D  ++++ P
Sbjct: 44 VSKVDRFLEDEAKGKSIIGAHTVEELCANLKRPRRVILLVMAGSADDAFIEQLLP 98

  Database: blastdb
    Posted date:  Apr 3, 2006  3:33 PM
  Number of letters in database: 16,596,109
  Number of sequences in database:  34,618
  
Lambda     K      H
   0.317    0.133    0.358 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 34618
Number of Hits to DB: 3,078,301
Number of extensions: 100254
Number of successful extensions: 280
Number of sequences better than 10.0: 30
Number of HSP's gapped: 252
Number of HSP's successfully gapped: 30
Length of query: 131
Length of database: 16,596,109
Length adjustment: 90
Effective length of query: 41
Effective length of database: 13,480,489
Effective search space: 552700049
Effective search space used: 552700049
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)